8T5S
Cryo-EM structure of DRH-1 helicase and C-terminal domain bound to dsRNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Dicer-related helicase | polymer | 1091 | 125155.4 | 1 | UniProt (G5EDI8) Pfam (PF00270) Pfam (PF00271) Pfam (PF11648) | Caenorhabditis elegans | |
| 2 | B (C) | RNA (30-MER) | polymer | 30 | 9140.0 | 1 | synthetic construct | ||
| 3 | C (B) | RNA (30-MER) | polymer | 30 | 9831.2 | 1 | synthetic construct | ||
| 4 | D (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 5 | E (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 6 | F (A) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) |
Sequence modifications
A: 1 - 1037 (UniProt: G5EDI8)
| PDB | External Database | Details |
|---|---|---|
| Met -53 | - | initiating methionine |
| Ala -52 | - | expression tag |
| Ser -51 | - | expression tag |
| Trp -50 | - | expression tag |
| Ser -49 | - | expression tag |
| His -48 | - | expression tag |
| Pro -47 | - | expression tag |
| Gln -46 | - | expression tag |
| Phe -45 | - | expression tag |
| Glu -44 | - | expression tag |
| Lys -43 | - | expression tag |
| Gly -42 | - | expression tag |
| Gly -41 | - | expression tag |
| Gly -40 | - | expression tag |
| Ala -39 | - | expression tag |
| Arg -38 | - | expression tag |
| Gly -37 | - | expression tag |
| Gly -36 | - | expression tag |
| Ser -35 | - | expression tag |
| Gly -34 | - | expression tag |
| Gly -33 | - | expression tag |
| Gly -32 | - | expression tag |
| Ser -31 | - | expression tag |
| Trp -30 | - | expression tag |
| Ser -29 | - | expression tag |
| His -28 | - | expression tag |
| Pro -27 | - | expression tag |
| Gln -26 | - | expression tag |
| Phe -25 | - | expression tag |
| Glu -24 | - | expression tag |
| Lys -23 | - | expression tag |
| Gly -22 | - | expression tag |
| Phe -21 | - | expression tag |
| Asp -20 | - | expression tag |
| Tyr -19 | - | expression tag |
| Lys -18 | - | expression tag |
| Asp -17 | - | expression tag |
| Asp -16 | - | expression tag |
| Asp -15 | - | expression tag |
| Asp -14 | - | expression tag |
| Lys -13 | - | expression tag |
| Gly -12 | - | expression tag |
| Thr -11 | - | expression tag |
| Arg -10 | - | expression tag |
| Ser -9 | - | expression tag |
| Pro -8 | - | expression tag |
| Leu -7 | - | expression tag |
| Glu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Leu -4 | - | expression tag |
| Phe -3 | - | expression tag |
| Gln -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Pro 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 144126.6 | |
| Non-Polymers* | Number of molecules | 3 |
| Total formula weight | 516.9 | |
| All* | Total formula weight | 144643.5 |
