8T5N
Crystal Structure of Glycine--tRNA ligase from Mycobacterium tuberculosis (AMP-Mg bound)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Glycine--tRNA ligase | polymer | 476 | 54475.2 | 1 | UniProt (P9WFV7) Pfam (PF00587) Pfam (PF03129) | Mycobacterium tuberculosis | Glycyl-tRNA synthetase,GlyRS |
| 2 | B, C (A) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 3 | D (A) | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
| 4 | E, F (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 5 | G (A) | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
| 6 | H, I, J, K, L (A) | IMIDAZOLE | non-polymer | 69.1 | 5 | Chemie (IMD) | |||
| 7 | M (A) | ADENOSINE MONOPHOSPHATE | non-polymer | 347.2 | 1 | Chemie (AMP) | |||
| 8 | N (A) | water | water | 18.0 | 368 | Chemie (HOH) |
Sequence modifications
A: -3 - 461 (UniProt: P9WFV7)
| PDB | External Database | Details |
|---|---|---|
| Met -16 | - | initiating methionine |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| His -9 | - | expression tag |
| His -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Gly -6 | - | expression tag |
| Gly -5 | - | expression tag |
| Gly -4 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 54475.2 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 997.6 | |
| All* | Total formula weight | 55472.8 |






