8T5N
Crystal Structure of Glycine--tRNA ligase from Mycobacterium tuberculosis (AMP-Mg bound)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Glycine--tRNA ligase | polymer | 476 | 54475.2 | 1 | UniProt (P9WFV7) Pfam (PF00587) Pfam (PF03129) In PDB | Mycobacterium tuberculosis | Glycyl-tRNA synthetase,GlyRS |
2 | A | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
3 | A | CALCIUM ION | non-polymer | 40.1 | 1 | Chemie (CA) | |||
4 | A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
5 | A | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
6 | A | IMIDAZOLE | non-polymer | 69.1 | 5 | Chemie (IMD) | |||
7 | A | ADENOSINE MONOPHOSPHATE | non-polymer | 347.2 | 1 | Chemie (AMP) | |||
8 | water | water | 18.0 | 368 | Chemie (HOH) |
Sequence modifications
A: -3 - 461 (UniProt: P9WFV7)
PDB | External Database | Details |
---|---|---|
Met -16 | - | initiating methionine |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
His -9 | - | expression tag |
His -8 | - | expression tag |
Gly -7 | - | expression tag |
Gly -6 | - | expression tag |
Gly -5 | - | expression tag |
Gly -4 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 54475.2 | |
Non-Polymers* | Number of molecules | 12 |
Total formula weight | 997.6 | |
All* | Total formula weight | 55472.8 |