8T2U
Cryo-EM Structures of Full-length Integrin alphaIIbbeta3 in Native Lipids complexed with Eptifibatide
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | Integrin alpha-IIb | polymer | 1008 | 110106.4 | 1 | UniProt (P08514) Pfam (PF01839) Pfam (PF08441) Pfam (PF20805) Pfam (PF20806) Pfam (PF00357) | Homo sapiens (human) | GPalpha IIb,GPIIb,Platelet membrane glycoprotein IIb |
2 | B (B) | Integrin beta-3 | polymer | 762 | 84478.5 | 1 | UniProt (P05106) Pfam (PF07974) Pfam (PF07965) Pfam (PF08725) Pfam (PF17205) Pfam (PF00362) Pfam (PF18372) | Homo sapiens (human) | Platelet membrane glycoprotein IIIa,GPIIIa |
3 | C (C) | Eptifibatide | polymer | 8 | 833.0 | 1 | synthetic construct | ||
4 | D (D) | beta-D-mannopyranose-(1-4)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G53755TJ) | |||
5 | E (E) | beta-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G40894EI) | |||
6 | F (F) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
7 | G, O (A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
8 | H, I, J, K, M... (A, B) | CALCIUM ION | non-polymer | 40.1 | 6 | Chemie (CA) | |||
9 | L (B) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
10 | P (B) | water | water | 18.0 | 2 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 195417.9 | |
Branched | Number of molecules | 3 |
Total formula weight | 1921.8 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 707.2 | |
All* | Total formula weight | 198046.8 |