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8T1E

Closed-state cryo-EM structure of full-length human TRPV4 in the presence of 4a-PDD

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
Transient receptor potential cation channel subfamily V member 4,Enhanced green fluorescent proteinpolymer1132127717.94UniProt (Q9HBA0)
UniProt (C5MKY7)
Pfam (PF00023)
Pfam (PF00520)
Homo sapiens (human)TrpV4,Osm-9-like TRP channel 4,OTRPC4,Transient receptor potential protein 12,TRP12,Vanilloid receptor-like channel 2,Vanilloid receptor-like protein 2,VRL-2,Vanilloid receptor-related osmotically-activated channel,VR-OAC
2AA, BA, DA, E, EA...
(B, C, A, D)
[(2~{R})-2-[(~{Z})-hexadec-9-enoyl]oxy-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] (~{Z})-docos-13-enoatenon-polymer815.232Chemie (9ZR)
3CA, JA, K, N, NA...
(C, A, D, B)
(2R)-2-{[(4-O-hexopyranosyl-beta-D-glucopyranosyl)oxy]methyl}-4-{[(25R)-5beta,14beta,17beta-spirostan-3beta-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-beta-D-glucopyranosidenon-polymer1165.38Chemie (YJ0)
4O, P, Q
(A)
SODIUM IONnon-polymer23.03Chemie (NA)
5VA, WA, XA, YA
(A, B, C, D)
waterwater18.036Chemie (HOH)
Sequence modifications
A, B, C, D: 1 - 871 (UniProt: Q9HBA0)
PDBExternal DatabaseDetails
Leu 872-linker
Val 873-linker
Pro 874-linker
Arg 875-linker
Gly 876-linker
Ser 877-linker
Ala 878-linker
Ala 879-linker
Ala 880-linker
Ala 881-linker
A, B, C, D: 882 - 1119 (UniProt: C5MKY7)
PDBExternal DatabaseDetails
Lys 1087Ala 207engineered mutation
Ser 1120-expression tag
Gly 1121-expression tag
Leu 1122-expression tag
Arg 1123-expression tag
Ser 1124-expression tag
Trp 1125-expression tag
Ser 1126-expression tag
His 1127-expression tag
Pro 1128-expression tag
Gln 1129-expression tag
Phe 1130-expression tag
Glu 1131-expression tag
Lys 1132-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight510871.8
Non-Polymers*Number of molecules43
Total formula weight35477.1
All*Total formula weight546348.8
*Water molecules are not included.

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PDB entries from 2024-11-20

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