8STS
Crystal Structure of HIV-1 Reverse Transcriptase (Y181C, V106A) varient in Complex with 5-(2-(2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy)-4-fluorophenoxy)-7-fluoro-2-naphthonitrile (JLJ636), a non-nucleoside inhibitor
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B (C, A) | Reverse transcriptase/ribonuclease H | polymer | 558 | 64014.3 | 2 | UniProt (P03366) Pfam (PF00078) Pfam (PF06817) Pfam (PF06815) Pfam (PF00075) | Human immunodeficiency virus type 1 BH10 | Exoribonuclease H,p66 RT |
2 | C, D (B, D) | p51 RT | polymer | 428 | 50039.5 | 2 | UniProt (P03366) Pfam (PF00078) Pfam (PF06817) Pfam (PF06815) | Human immunodeficiency virus 1 | |
3 | E, G (C, A) | 5-{2-[2-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)ethoxy]-4-fluorophenoxy}-7-fluoronaphthalene-2-carbonitrile | non-polymer | 435.4 | 2 | Chemie (7N1) | |||
4 | F, H (C, A) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
5 | I, J, K (C, A, D) | water | water | 18.0 | 12 | Chemie (HOH) |
Sequence modifications
C, A: 1 - 556 (UniProt: P03366)
B, D: 1 - 428 (UniProt: P03366)
PDB | External Database | Details |
---|---|---|
Met -1 | - | expression tag |
Val 0 | - | expression tag |
Ala 106 | Val 705 | engineered mutation |
Ala 172 | Lys 771 | conflict |
Ala 173 | Lys 772 | conflict |
Cys 181 | Tyr 780 | engineered mutation |
Ser 280 | Cys 879 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Ser 280 | Cys 879 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 228107.6 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 919.4 | |
All* | Total formula weight | 229027.0 |