8SSU
ZnFs 3-11 of CCCTC-binding factor (CTCF) Complexed with 19mer DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Transcriptional repressor CTCF,LIM domain-binding protein 1 | polymer | 345 | 40142.4 | 1 | UniProt (P49711) UniProt (Q86U70) Pfam (PF00096) Pfam (PF23611) | Homo sapiens (human) | |
| 2 | B (B) | DNA (19-MER) Strand I | polymer | 19 | 5724.7 | 1 | Homo sapiens | ||
| 3 | C (C) | DNA (19-MER) Strand II | polymer | 19 | 5929.8 | 1 | Homo sapiens | ||
| 4 | D, M (A, C) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 5 | E, F, G, H, I... (A) | ZINC ION | non-polymer | 65.4 | 8 | Chemie (ZN) | |||
| 6 | N, O, P (A, B, C) | water | water | 18.0 | 6 | Chemie (HOH) |
Sequence modifications
A: 320 - 582 (UniProt: P49711)
A: 601 - 664 (UniProt: Q86U70)
| PDB | External Database | Details |
|---|---|---|
| Gly 583 | - | linker |
| Ser 584 | - | linker |
| Gly 585 | - | linker |
| Gly 586 | - | linker |
| His 587 | - | linker |
| Met 588 | - | linker |
| Gly 589 | - | linker |
| Ser 590 | - | linker |
| Gly 591 | - | linker |
| Gly 592 | - | linker |
| Leu 593 | - | linker |
| Val 594 | - | linker |
| Pro 595 | - | linker |
| Arg 596 | - | linker |
| Gly 597 | - | linker |
| Ser 598 | - | linker |
| Gly 599 | - | linker |
| Gly 600 | - | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 51796.9 | |
| Non-Polymers* | Number of molecules | 10 |
| Total formula weight | 647.4 | |
| All* | Total formula weight | 52444.3 |
