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8SAZ

CryoEM structure of DH270.I5.6-CH848.10.17

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E, I
(A, E, K)
Envelope glycoprotein gp160polymer47152847.93UniProt (A0A1W6IPB2)
Pfam (PF00516)
HIV-1 06TG.HT008Env polyprotein
2B, F, J
(B, F, L)
CH848.10.17.SOSIP gp41polymer13214733.73HIV-1 06TG.HT008
3C, G, K
(C, H, M)
DH270.I5.6 variable heavy chainpolymer12714188.83Homo sapiens (human)
4D, H, L
(D, I, N)
DH270.I5.6 variable light chainpolymer11011437.63Homo sapiens (human)
5M, Q
(J, Q)
alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched910.82In PDB
GlyTouCan (G22768VO)
6N, S, V
(G, S, V)
alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched1721.53In PDB
GlyTouCan (G40702WU)
7O, R, U, W
(O, R, U, W)
alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched748.74In PDB
GlyTouCan (G81315DD)
8P, T, X
(P, T, X)
beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched586.53In PDB
GlyTouCan (G15407YE)
Sequence modifications
A, E, K: 34 - 505 (UniProt: A0A1W6IPB2)
PDBExternal DatabaseDetails
Ala 31-expression tag
Glu 32-expression tag
Asn 33-expression tag
Cys 201Val 189conflict
Cys 433Ala 417conflict
Lys 490Glu 474conflict
Glu 492Gln 476conflict
Val 496Ile 480conflict
Arg 500Gly 484conflict
Cys 501Ala 485conflict
Val 506-expression tag
Gly 507-expression tag
Arg 508-expression tag
Arg 509-expression tag
Arg 510-expression tag
Arg 511-expression tag
Arg 512-expression tag
Arg 513-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight279623.8
BranchedNumber of molecules12
Total formula weight11740.6
All*Total formula weight291364.4
*Water molecules are not included.

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PDB entries from 2025-06-18

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