8S3A
Crystal structure of Medicago truncatula glutamate dehydrogenase 2 in complex with 2,6-pyridinedicarboxylic acid and NAD
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D, E... | Glutamate dehydrogenase | polymer | 414 | 44894.0 | 6 | UniProt (G7JYL4) In PDB | Medicago truncatula (barrel medic) | |
| 2 | A | (4S)-2-METHYL-2,4-PENTANEDIOL | non-polymer | 118.2 | 1 | Chemie (MPD) | |||
| 3 | D, E, A, F, B... | 1,2-ETHANEDIOL | non-polymer | 62.1 | 22 | Chemie (EDO) | |||
| 4 | A | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
| 5 | D, A, E, B, F... | NICOTINAMIDE-ADENINE-DINUCLEOTIDE | non-polymer | 663.4 | 6 | Chemie (NAD) | |||
| 6 | C, D, A, E, B... | SODIUM ION | non-polymer | 23.0 | 8 | Chemie (NA) | |||
| 7 | E, F | PYRIDINE-2,6-DICARBOXYLIC ACID | non-polymer | 167.1 | 2 | Chemie (PDC) | |||
| 8 | E | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
| 9 | F | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 1 | Chemie (PG4) | |||
| 10 | water | water | 18.0 | 1092 | Chemie (HOH) |
Sequence modifications
A, B, C, D, E, F: 1 - 411 (UniProt: G7JYL4)
| PDB | External Database | Details |
|---|---|---|
| Ser -2 | - | expression tag |
| Asn -1 | - | expression tag |
| Ala 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 6 |
| Total formula weight | 269364.1 | |
| Non-Polymers* | Number of molecules | 42 |
| Total formula weight | 6432.9 | |
| All* | Total formula weight | 275797.0 |
