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8S1X

Crystal structure of Actinonin-bound PDF1 and the computationally designed DBAct553_1 protein binder

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Peptide deformylasepolymer16819391.21UniProt (Q9I7A8)
Pfam (PF01327)
Pseudomonas aeruginosaPDF,Polypeptide deformylase
2B
(B)
DBAct553_1polymer708152.41synthetic construct
3C
(A)
ZINC IONnon-polymer65.41Chemie (ZN)
4D
(A)
ACTINONINnon-polymer385.51Chemie (BB2)
5E, F, G, H, I...
(A)
FORMIC ACIDnon-polymer46.08Chemie (FMT)
6M, N, O, P
(A)
PHOSPHATE IONnon-polymer95.04Chemie (PO4)
7Q
(B)
POTASSIUM IONnon-polymer39.11Chemie (K)
8R, S
(A, B)
waterwater18.076Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight27543.5
Non-Polymers*Number of molecules15
Total formula weight1238.1
All*Total formula weight28781.6
*Water molecules are not included.

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PDB entries from 2025-06-11

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