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8RTB

Extended inner membrane complex (IMC) protomer structure (TrwM/VirB3-TrwK/VirB4-TrwI/VirB6-TrwG/VirB8-TrwE/VirB10) from the fully-assembled R388 type IV secretion system determined by cryo-EM.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1CTrwM proteinpolymer10412292.61UniProt (O50329)
Pfam (PF05101)
In PDB
Escherichia coli
2A, BTrwK proteinpolymer82393769.92UniProt (O50330)
Pfam (PF03135)
Pfam (PF19044)
In PDB
Escherichia coli
3E, D, F, GTrwG proteinpolymer23125800.04UniProt (O50335)
Pfam (PF04335)
In PDB
Escherichia coli
4HTrwE proteinpolymer39542443.81UniProt (O50337)
Pfam (PF03743)
In PDB
Escherichia coli
5JTrwI proteinpolymer34235324.21UniProt (O50333)
Pfam (PF04610)
In PDB
Escherichia coli
Sequence modifications
C: 1 - 104 (UniProt: O50329)
PDBExternal DatabaseDetails
Trp 24Leu 24conflict
Val 26Glu 26conflict
E, D, F, G: 1 - 231 (UniProt: O50335)
PDBExternal DatabaseDetails
Ala 188Arg 188conflict
H: 1 - 395 (UniProt: O50337)
PDBExternal DatabaseDetails
Asp 335Asn 335conflict
J: 1 - 342 (UniProt: O50333)
PDBExternal DatabaseDetails
Gln 108Glu 108conflict
Leu 152Pro 152conflict
Leu 153Ala 153conflict
Ala 154Gly 154conflict
Thr 155Tyr 155conflict
Leu 157Pro 157conflict
Leu 158Ala 158conflict
Ala 159Gly 159conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains9
Total formula weight380800.4
All*Total formula weight380800.4
*Water molecules are not included.

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PDB entries from 2024-07-17

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