8RS6
Crystal structure of Zika Virus NS2B-NS3 protease in complex with compound 1
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Genome polyprotein | polymer | 227 | 23950.8 | 2 | UniProt (A0A140DLX4) | Zika virus | |
| 2 | C, D (A, B) | (1~{E})-1-[3-[(2~{R})-1-phenylpropan-2-yl]-2~{H}-1,2,3-oxadiazol-3-ium-5-ylidene]-3-[3-(trifluoromethyl)phenyl]urea | non-polymer | 391.4 | 2 | Chemie (A1H2Z) | |||
| 3 | E, F (A, B) | water | water | 18.0 | 66 | Chemie (HOH) |
Sequence modifications
A, B: 48 - 1170 (UniProt: A0A140DLX4)
| PDB | External Database | Details |
|---|---|---|
| Met 48 | Ser 1420 | conflict |
| - | Arg 1467 | deletion |
| - | Glu 1468 | deletion |
| - | Ile 1469 | deletion |
| - | Ile 1470 | deletion |
| - | Leu 1471 | deletion |
| - | Lys 1472 | deletion |
| - | Val 1473 | deletion |
| - | Val 1474 | deletion |
| - | Leu 1475 | deletion |
| - | Met 1476 | deletion |
| - | Thr 1477 | deletion |
| - | Ile 1478 | deletion |
| - | Cys 1479 | deletion |
| - | Gly 1480 | deletion |
| - | Met 1481 | deletion |
| - | Asn 1482 | deletion |
| - | Pro 1483 | deletion |
| - | Ile 1484 | deletion |
| - | Ala 1485 | deletion |
| - | Ile 1486 | deletion |
| - | Pro 1487 | deletion |
| - | Phe 1488 | deletion |
| - | Ala 1489 | deletion |
| - | Ala 1490 | deletion |
| - | Gly 1491 | deletion |
| - | Ala 1492 | deletion |
| Ala 991 | Trp 1493 | linker |
| Gly 992 | Tyr 1494 | linker |
| Gly 993 | Val 1495 | linker |
| Gly 994 | Tyr 1496 | linker |
| Gly 995 | Val 1497 | linker |
| Ser 996 | Lys 1498 | linker |
| Gly 997 | Thr 1499 | linker |
| Gly 999 | Lys 1501 | linker |
| Gly 1000 | Arg 1502 | linker |
| Gly 1029 | Arg 1531 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 47901.7 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 782.7 | |
| All* | Total formula weight | 48684.4 |






