8RJJ
HCV E1/E2 homodimer complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | C, A | Genome polyprotein | polymer | 191 | 20681.8 | 2 | UniProt (Q81424) Pfam (PF01539) In PDB | Hepacivirus hominis | |
2 | D, B | HCV S52 E2 | polymer | 369 | 41050.8 | 2 | UniProt (A9YFN8) Pfam (PF01560) In PDB | Hepacivirus hominis | |
3 | L, E, F, G, H... | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 10 | In PDB GlyTouCan (G42666HT) | |||
4 | O, P, Q, R, S... | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 8 | In PDB GlyTouCan (G15407YE) | |||
5 | D, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) |
Sequence modifications
C, A: 193 - 383 (UniProt: Q81424)
D, B: 384 - 752 (UniProt: A9YFN8)
PDB | External Database | Details |
---|---|---|
Asp 233 | Gly 42 | conflict |
Thr 237 | Met 46 | conflict |
Val 355 | Ile 164 | conflict |
Ile 359 | Leu 168 | conflict |
Phe 362 | Tyr 171 | conflict |
Val 365 | Gln 174 | conflict |
Leu 372 | Ala 181 | conflict |
Val 373 | Ile 182 | conflict |
Leu 375 | Met 184 | conflict |
Leu 376 | Ile 185 | conflict |
Leu 377 | Met 186 | conflict |
Ala 379 | Ser 188 | conflict |
PDB | External Database | Details |
---|---|---|
Gly 576 | Glu 576 | conflict |
Asn 578 | Asp 578 | conflict |
Gly 580 | Glu 580 | conflict |
Leu 694 | Gly 694 | conflict |
Gly 695 | Leu 695 | conflict |
Tyr 724 | Phe 724 | conflict |
Val 726 | Ile 726 | conflict |
Leu 728 | Val 728 | conflict |
Ser 739 | Val 739 | conflict |
Cys 740 | Ala 740 | conflict |
Met 743 | Leu 743 | conflict |
Leu 746 | Met 746 | conflict |
Ile 747 | Val 747 | conflict |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 123465.2 | |
Branched | Number of molecules | 18 |
Total formula weight | 8936.3 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 442.4 | |
All* | Total formula weight | 132844.0 |