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8RIU

Crystal structure of the F420-reducing carbon monoxide dehydrogenase component from the ethanotroph Candidatus Ethanoperedens thermophilum

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D
(A, D)
Acetyl-CoA decarbonylase/synthase complex subunit alphapolymer79287549.12UniProt (A0A7R9N4A5)
Pfam (PF03063)
Candidatus Methanoperedenaceae archaeon GB50ACDS complex subunit alpha,ACDS complex carbon monoxide dehydrogenase subunit alpha,ACDS CODH subunit alpha
2B, E
(B, E)
Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminuspolymer37040730.82UniProt (A0A7R9R773)
Pfam (PF04422)
Pfam (PF04432)
Candidatus Methanoperedenaceae archaeon GB50
3C, F
(C, F)
Acetyl-CoA decarbonylase/synthase complex subunit epsilonpolymer17419058.02UniProt (A0A7R9N5A2)
Pfam (PF02552)
Candidatus Methanoperedenaceae archaeon GB50ACDS complex subunit epsilon,ACDS complex carbon monoxide dehydrogenase subunit epsilon,ACDS CODH subunit epsilon
4AB, G, GA, HA, IA...
(F, A, B, C, D...)
GLYCEROLnon-polymer92.115Chemie (GOL)
5BA, H, I, J, K...
(B, A, D, F)
1,2-ETHANEDIOLnon-polymer62.111Chemie (EDO)
6CA, DA, FA, MA, NA...
(B, D, A, E)
IRON/SULFUR CLUSTERnon-polymer351.613Chemie (SF4)
7PA, R
(D, A)
FE(4)-NI(1)-S(4) CLUSTERnon-polymer410.32Chemie (XCC)
8AA, SA
(A, D)
POTASSIUM IONnon-polymer39.12Chemie (K)
9EA, VA
(B, E)
FLAVIN-ADENINE DINUCLEOTIDEnon-polymer785.52Chemie (FAD)
10QA
(D)
2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOLnon-polymer354.41Chemie (PE4)
11RA
(D)
CHLORIDE IONnon-polymer35.51Chemie (CL)
12BB, CB, DB, EB, FB...
(A, B, C, D, E...)
waterwater18.01418Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight294675.7
Non-Polymers*Number of molecules47
Total formula weight9495.3
All*Total formula weight304171.0
*Water molecules are not included.

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PDB entries from 2025-06-25

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