8REV
Structure of XPD stalled at a Y-fork DNA containing a interstrand crosslink
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | ATP-dependent DNA helicase CHL1 | polymer | 797 | 91847.2 | 1 | UniProt (G0RZH0) Pfam (PF06733) Pfam (PF06777) Pfam (PF13307) In PDB | Thermochaetoides thermophila | ATP-dependent DNA helicase chl1,Chromosome loss protein 1,General transcription and DNA repair factor IIH helicase subunit XPD |
| 2 | D | General transcription and DNA repair factor IIH | polymer | 534 | 58098.5 | 1 | UniProt (G0RZE6) Pfam (PF04056) Pfam (PF07975) In PDB | Thermochaetoides thermophila | |
| 3 | E | DNA (47-MER) | polymer | 47 | 14448.3 | 1 | Homo sapiens | ||
| 4 | B | DNA (46-MER) | polymer | 46 | 14329.3 | 1 | Homo sapiens | ||
| 5 | A | IRON/SULFUR CLUSTER | non-polymer | 351.6 | 1 | Chemie (SF4) | |||
| 6 | A | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) |
Sequence modifications
A: 1 - 797 (UniProt: G0RZH0)
B: 65 - 82 (PDB: 8REV)
B: 83 - 122 (PDB: 8REV)
| PDB | External Database | Details |
|---|---|---|
| Asp 7 | - | insertion |
| Leu 8 | - | insertion |
| Pro 9 | - | insertion |
| Val 10 | - | insertion |
| Leu 11 | - | insertion |
| Phe 12 | - | insertion |
| Pro 13 | - | insertion |
| Tyr 14 | - | insertion |
| Pro 15 | - | insertion |
| Arg 16 | - | insertion |
| Ile 17 | - | insertion |
| Tyr 18 | - | insertion |
| Pro 19 | - | insertion |
| Glu 20 | - | insertion |
| Gln 21 | - | insertion |
| Tyr 22 | - | insertion |
| Ala 23 | - | insertion |
B: 83 - 122 (PDB: 8REV)
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 178723.2 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 778.8 | |
| All* | Total formula weight | 179502.1 |
