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8RDN

Holomycin methyltransferase DtpM with SAH and XRD-271

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
DtpMpolymer35238382.44Pfam (PF00891)
UniProt (by SIFTS) (A0A8T8HXW2)
Xenorhabdus doucetiae FRM16 = DSM 17909
2E, G, L, P
(A, B, C, D)
S-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.44Chemie (SAH)
3F, H, M, Q
(A, B, C, D)
~{N}-(5-oxidanylidene-4~{H}-[1,2]dithiolo[4,3-b]pyrrol-6-yl)hexanamidenon-polymer270.44Chemie (YRH)
4I, N, R
(B, C, D)
CHLORIDE IONnon-polymer35.53Chemie (CL)
5J
(B)
GLYCEROLnon-polymer92.11Chemie (GOL)
6K, O, S
(B, C, D)
SODIUM IONnon-polymer23.03Chemie (NA)
7T, U, V, W
(A, B, C, D)
waterwater18.0221Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight153529.7
Non-Polymers*Number of molecules15
Total formula weight2886.6
All*Total formula weight156416.2
*Water molecules are not included.

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PDB entries from 2025-06-18

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