8RAS
Plastid-encoded RNA polymerase transcription elongation complex
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | DNA-directed RNA polymerase subunit alpha | polymer | 327 | 37945.8 | 2 | UniProt (A0A6C0M610) UniProt (by SIFTS) (Q9XQN8) | Sinapis alba (white mustard) | |
| 2 | C (C) | DNA-directed RNA polymerase subunit beta | polymer | 1072 | 121209.1 | 1 | UniProt (A0A6C0M5W1) UniProt (by SIFTS) (P46818) | Sinapis alba (white mustard) | |
| 3 | D (D) | DNA-directed RNA polymerase subunit beta' | polymer | 680 | 78761.9 | 1 | UniProt (A0A6C0M5W0) | Sinapis alba (white mustard) | PEP,Plastid-encoded RNA polymerase subunit beta',RNA polymerase subunit beta' |
| 4 | E (E) | DNA-directed RNA polymerase subunit beta'' | polymer | 1373 | 156388.7 | 1 | UniProt (A0A6C0M829) | Sinapis alba (white mustard) | |
| 5 | F (F) | PAP1 | polymer | 911 | 103467.9 | 1 | Sinapis alba | ||
| 6 | G (G) | PAP2 | polymer | 862 | 96112.0 | 1 | Sinapis alba | ||
| 7 | H (H) | PAP3 | polymer | 675 | 79815.5 | 1 | Sinapis alba | ||
| 8 | I (I) | PAP4 | polymer | 263 | 30273.2 | 1 | Sinapis alba | ||
| 9 | J (J) | PAP5 | polymer | 529 | 60884.2 | 1 | Sinapis alba | ||
| 10 | K (K) | PAP6 | polymer | 460 | 52435.3 | 1 | Sinapis alba | ||
| 11 | L (L) | PAP7 | polymer | 483 | 55675.5 | 1 | Sinapis alba | ||
| 12 | M (M) | PAP8 | polymer | 334 | 38039.5 | 1 | Sinapis alba | ||
| 13 | N (N) | PAP9 | polymer | 297 | 34008.9 | 1 | Sinapis alba | ||
| 14 | O, P (O, P) | PAP10 | polymer | 185 | 20954.4 | 2 | Sinapis alba | ||
| 15 | Q (Q) | PAP11 | polymer | 768 | 85121.7 | 1 | Sinapis alba | ||
| 16 | R (R) | PAP12 | polymer | 162 | 18835.2 | 1 | Sinapis alba | ||
| 17 | S (S) | FLN2 | polymer | 611 | 68527.1 | 1 | Sinapis alba | ||
| 18 | T (T) | PTAC18 | polymer | 140 | 16430.0 | 1 | Sinapis alba | ||
| 19 | U (X) | DNA (81-MER) | polymer | 81 | 25062.1 | 1 | DNA molecule | ||
| 20 | V (Y) | DNA (81-MER) | polymer | 81 | 24821.9 | 1 | DNA molecule | ||
| 21 | W (Z) | RNA (40-MER) | polymer | 40 | 12819.7 | 1 | synthetic construct | ||
| 22 | X (D) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) PubChem (888) | |||
| 23 | Y (E) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 24 | BA, Z (N, I) | FE (III) ION | non-polymer | 55.8 | 2 | Chemie (FE) PubChem (29936) | |||
| 25 | AA (L) | S-ADENOSYL-L-HOMOCYSTEINE | non-polymer | 384.4 | 1 | Chemie (SAH) PubChem (16760024) PubChem (193) PubChem (25210495) PubChem (13792) PubChem (177678424) PubChem (44361184) PubChem (21125603) PubChem (46936206) PubChem (50989525) PubChem (25203782) PubChem (51380914) PubChem (52224398) PubChem (189149) PubChem (57544532) PubChem (439155) PubChem (59046843) PubChem (59170628) PubChem (59576228) PubChem (66805708) PubChem (70689219) PubChem (70702054) PubChem (70832431) PubChem (52224400) PubChem (5284331) PubChem (6419189) PubChem (118374891) PubChem (118560068) PubChem (71170554) PubChem (13231890) PubChem (164157219) PubChem (126969526) PubChem (129105892) PubChem (143518505) PubChem (154578335) PubChem (163054214) PubChem (163335525) | |||
| 26 | CA, DA, EA, FA, GA... (A, B, C, D, E...) | water | water | 18.0 | 254 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 327 (UniProt: A0A6C0M610)
C: 1 - 1072 (UniProt: A0A6C0M5W1)
| PDB | External Database | Details |
|---|---|---|
| Phe 67 | Ser 67 | conflict |
| PDB | External Database | Details |
|---|---|---|
| Phe 113 | Ser 113 | conflict |
| Val 657 | Ile 657 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 23 |
| Total formula weight | 1276489.5 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 585.8 | |
| All* | Total formula weight | 1277075.3 |
