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8R87

Cryo-EM structure of the Sars-Cov2 S trimer without RBDs

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
Spike glycoprotein,Fibritinpolymer1059116805.13UniProt (P0DTC2)
UniProt (P10104)
Pfam (PF16451)
Pfam (PF19209)
Pfam (PF01601)
Severe acute respiratory syndrome coronavirusS glycoprotein,E2,Peplomer protein,Collar protein,Whisker antigen control protein
Sequence modifications
A, B, C: 1 - 331 (UniProt: P0DTC2)
A, B, C: 530 - 1208 (UniProt: P0DTC2)
PDBExternal DatabaseDetails
Gly 332-linker
Ser 333-linker
Gly 334-linker
Ser 335-linker
Gly 336-linker
Ser 337-linker
Gly 682Arg 682engineered mutation
Ser 683Arg 683engineered mutation
Ser 685Arg 685engineered mutation
Pro 817Phe 817engineered mutation
Pro 892Ala 892engineered mutation
Pro 899Ala 899engineered mutation
Pro 942Ala 942engineered mutation
Pro 986Lys 986engineered mutation
Pro 987Val 987engineered mutation
Gly 1209-linker
Ser 1210-linker
A, B, C: 1211 - 1237 (UniProt: P10104)
PDBExternal DatabaseDetails
Leu 1232Phe 479engineered mutation
Gly 1238-expression tag
Arg 1239-expression tag
Ser 1240-expression tag
Gly 1241-expression tag
Ser 1242-expression tag
Gly 1243-expression tag
His 1244-expression tag
His 1245-expression tag
His 1246-expression tag
His 1247-expression tag
His 1248-expression tag
His 1249-expression tag
His 1250-expression tag
His 1251-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight350415.3
All*Total formula weight350415.3
*Water molecules are not included.

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PDB entries from 2025-06-11

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