8R6F
CryoEM structure of wheat 40S ribosomal subunit, body domain
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (Y) | 40S ribosomal protein S24 | polymer | 137 | 15769.7 | 1 | UniProt (A0A3B6RHV8) Pfam (PF01282) | Triticum aestivum (bread wheat) | |
| 2 | B (X) | 40S ribosomal protein S23 | polymer | 142 | 15696.5 | 1 | UniProt (W5FV77) Pfam (PF00164) | Triticum aestivum (bread wheat) | |
| 3 | C (E) | 40S ribosomal protein S4 | polymer | 265 | 30008.1 | 1 | UniProt (A0A1D5SLI4) Pfam (PF08071) Pfam (PF01479) Pfam (PF00900) Pfam (PF00467) Pfam (PF16121) | Triticum aestivum (bread wheat) | |
| 4 | D (O) | 30S ribosomal protein S11, chloroplastic | polymer | 151 | 16398.8 | 1 | UniProt (A0A3B6SS17) Pfam (PF00411) | Triticum aestivum (bread wheat) | |
| 5 | E (W) | Small ribosomal subunit protein uS8c | polymer | 130 | 14815.4 | 1 | UniProt (E2F3W4) Pfam (PF00410) | Triticum aestivum (bread wheat) | |
| 6 | F (b) | 40S ribosomal protein S27 | polymer | 86 | 9583.2 | 1 | UniProt (A0A341UET3) Pfam (PF01667) | Triticum aestivum (bread wheat) | |
| 7 | G (e) | 40S ribosomal protein S30 | polymer | 62 | 6934.2 | 1 | UniProt (A0A3B6S9M7) Pfam (PF04758) | Triticum aestivum (bread wheat) | |
| 8 | H (k) | Small ribosomal subunit protein uS2 | polymer | 308 | 33300.4 | 1 | UniProt (W5E2W7) Pfam (PF00318) | Triticum aestivum (bread wheat) | |
| 9 | I (B) | Small ribosomal subunit protein eS1 | polymer | 263 | 30044.0 | 1 | UniProt (A0A3B6IU74) Pfam (PF01015) | Triticum aestivum (bread wheat) | |
| 10 | J (V) | Genome assembly, chromosome: II | polymer | 81 | 8993.0 | 1 | UniProt (A0A7H4LCS1) Pfam (PF01249) UniProt (by SIFTS) (A0A0C4BJ86) | Triticum aestivum (bread wheat) | |
| 11 | K (a) | 40S ribosomal protein S26 | polymer | 139 | 15319.8 | 1 | UniProt (A0A3B6KQB8) Pfam (PF01283) | Triticum aestivum (bread wheat) | |
| 12 | L (J) | 30S ribosomal protein S4, chloroplastic | polymer | 195 | 22534.1 | 1 | UniProt (W5FPA7) Pfam (PF00163) Pfam (PF01479) | Triticum aestivum (bread wheat) | |
| 13 | M (C) | S5 DRBM domain-containing protein | polymer | 275 | 30081.1 | 1 | UniProt (A0A3B6KRQ3) Pfam (PF00333) Pfam (PF03719) | Triticum aestivum (bread wheat) | |
| 14 | N (G) | 40S ribosomal protein S6 | polymer | 250 | 28522.6 | 1 | UniProt (W5C8N6) Pfam (PF01092) | Triticum aestivum (bread wheat) | |
| 15 | O (H) | 40S ribosomal protein S7 | polymer | 192 | 22297.9 | 1 | UniProt (Q5I7K2) Pfam (PF01251) | Triticum aestivum (bread wheat) | |
| 16 | P (h) | 40S ribosomal protein S17 | polymer | 143 | 16479.1 | 1 | UniProt (A0A3B5XY60) Pfam (PF00833) | Triticum aestivum (bread wheat) | |
| 17 | Q (L) | Small ribosomal subunit protein uS17 N-terminal domain-containing protein | polymer | 159 | 17841.1 | 1 | UniProt (W5BFB7) Pfam (PF16205) Pfam (PF00366) | Triticum aestivum (bread wheat) | |
| 18 | R (N) | Small ribosomal subunit protein uS15 N-terminal domain-containing protein | polymer | 151 | 17132.3 | 1 | UniProt (W5I035) Pfam (PF08069) Pfam (PF00312) | Triticum aestivum (bread wheat) | |
| 19 | S (n) | Large ribosomal subunit protein eL41z/eL41y/eL41x/eL41w/eL41v | polymer | 25 | 3445.4 | 1 | UniProt (P62120) Pfam (PF05162) | Triticum aestivum (bread wheat) | |
| 20 | T (I) | 40S ribosomal protein S8 | polymer | 224 | 25183.9 | 1 | UniProt (A0A1D5UKZ4) Pfam (PF01201) | Triticum aestivum (bread wheat) | |
| 21 | U (A) | RNA (1177-MER) | polymer | 1810 | 584382.8 | 1 | Triticum aestivum | ||
| 22 | V (a) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 23 | AB, BB, CB, DB, EB... (A, G) | MAGNESIUM ION | non-polymer | 24.3 | 32 | Chemie (MG) | |||
| 24 | AA, BA, CA, DA, EA... (A) | POTASSIUM ION | non-polymer | 39.1 | 14 | Chemie (K) | |||
| 25 | AC, BC, CC, DC, EC... (G, L, N, I, A...) | water | water | 18.0 | 1067 | Chemie (HOH) |
Sequence modifications
O: 1 - 151 (UniProt: A0A3B6SS17)
| PDB | External Database | Details |
|---|---|---|
| Ias 138 | Asp 138 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 21 |
| Total formula weight | 964763.3 | |
| Non-Polymers* | Number of molecules | 47 |
| Total formula weight | 1390.5 | |
| All* | Total formula weight | 966153.9 |
