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8R5T

Crystal structure of NDM-1 in complex with benzobisheterocycle compound 14.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Metallo-beta-lactamase type 2polymer24425776.02UniProt (C7C422)Klebsiella pneumoniaeB2 metallo-beta-lactamase,Beta-lactamase type II,Metallo-beta-lactamase NDM-1,Metallo-beta-lactamase type II,New Delhi metallo-beta-lactamase-1,NDM-1
2C
(A)
[(1~{R},3~{a}~{R})-1,3,3~{a},4-tetrahydro-[1,3]thiazolo[3,4-a]benzimidazol-1-yl]methanethiolnon-polymer224.31Chemie (Y4E)
3D, E, H, I
(A, B)
ZINC IONnon-polymer65.44Chemie (ZN)
4F, G
(A)
SULFATE IONnon-polymer96.12Chemie (SO4)
5J, K
(A, B)
waterwater18.0343Chemie (HOH)
Sequence modifications
A, B: 29 - 270 (UniProt: C7C422)
PDBExternal DatabaseDetails
Gly 27-expression tag
Ser 28-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight51551.9
Non-Polymers*Number of molecules7
Total formula weight678.1
All*Total formula weight52230.0
*Water molecules are not included.

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PDB entries from 2026-01-28

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