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8R1M

Structure of TxGH116 with covalently bound N-azido-octyl aziridine

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Glucosylceramidasepolymer79991794.22UniProt (F6BL85)
Pfam (PF12215)
Pfam (PF04685)
Thermoanaerobacterium xylanolyticum LX-11
2C, I
(A, B)
CALCIUM IONnon-polymer40.12Chemie (CA)
3D, E, J
(A, B)
CHLORIDE IONnon-polymer35.53Chemie (CL)
4F, G, L
(A, B)
SULFATE IONnon-polymer96.13Chemie (SO4)
5H, K
(A, B)
(1R,2R,3R,4S)-4-[8-(azanyldiazenyl)octylamino]-3-(hydroxymethyl)cyclopentane-1,2-diolnon-polymer302.42Chemie (XHR)
6M, N
(A, B)
waterwater18.0880Chemie (HOH)
Sequence modifications
A, B: 19 - 806 (UniProt: F6BL85)
PDBExternal DatabaseDetails
Ala 16-expression tag
Met 17-expression tag
Ala 18-expression tag
Leu 807-expression tag
Glu 808-expression tag
His 809-expression tag
His 810-expression tag
His 811-expression tag
His 812-expression tag
His 813-expression tag
His 814-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight183588.4
Non-Polymers*Number of molecules10
Total formula weight1079.5
All*Total formula weight184667.9
*Water molecules are not included.

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PDB entries from 2025-12-10

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