8QZG

1,3 L,D-transpeptidase from Gluconobacter oxydans

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	1	YkuD domain-containing protein	polymer	328	36058.2	1	UniProt (A0A4R4A0U0) Pfam (PF03734) In PDB	Gluconobacter oxydans
2	1	CHLORIDE ION	non-polymer		35.5	1	Chemie (CL)
3	1	SODIUM ION	non-polymer		23.0	1	Chemie (NA)
4		water	water		18.0	133	Chemie (HOH)

Sequence modifications

1: 53 - 336 (UniProt: A0A4R4A0U0)

PDB	External Database	Details
Met 24	-	initiating methionine
Lys 25	-	expression tag
Tyr 26	-	expression tag
Leu 27	-	expression tag
Leu 28	-	expression tag
Pro 29	-	expression tag
Thr 30	-	expression tag
Ala 31	-	expression tag
Ala 32	-	expression tag
Ala 33	-	expression tag
Gly 34	-	expression tag
Leu 35	-	expression tag
Leu 36	-	expression tag
Leu 37	-	expression tag
Leu 38	-	expression tag
Ala 39	-	expression tag
Ala 40	-	expression tag
Gln 41	-	expression tag
Pro 42	-	expression tag
Ala 43	-	expression tag
Met 44	-	expression tag
Ala 45	-	expression tag
Met 46	-	expression tag
Asp 47	-	expression tag
Ile 48	-	expression tag
Gly 49	-	expression tag
Ile 50	-	expression tag
Asn 51	-	expression tag
Ser 52	-	expression tag
Ala 337	-	expression tag
Ala 338	-	expression tag
Lys 339	-	expression tag
Leu 340	-	expression tag
Ala 341	-	expression tag
Ala 342	-	expression tag
Ala 343	-	expression tag
Leu 344	-	expression tag
Glu 345	-	expression tag
His 346	-	expression tag
His 347	-	expression tag
His 348	-	expression tag
His 349	-	expression tag
His 350	-	expression tag
His 351	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	1
	Total formula weight	36058.2
Non-Polymers*	Number of molecules	2
	Total formula weight	58.4
All*	Total formula weight	36116.6

*Water molecules are not included.