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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

8QK7

E167K RF2 on E. coli 70S release complex with UAA

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1216S rRNApolymer1542499873.41GenBank (1758835854)Escherichia coli
2gSmall ribosomal subunit protein uS2polymer24126781.71UniProt (P0A7V0)
Pfam (PF00318)
In PDB		Escherichia coli30S ribosomal protein S2
3hSmall ribosomal subunit protein uS3polymer23326031.31UniProt (P0A7V3)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Escherichia coli30S ribosomal protein S3
4iSmall ribosomal subunit protein uS4polymer20623514.21UniProt (P0A7V8)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Escherichia coli30S ribosomal protein S4
5jSmall ribosomal subunit protein uS5polymer16717629.41UniProt (P0A7W1)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Escherichia coli30S ribosomal protein S5
6kSmall ribosomal subunit protein bS6, fully modified isoformpolymer13515727.51UniProt (P02358)
Pfam (PF01250)
In PDB		Escherichia coli
7lSmall ribosomal subunit protein uS7polymer17920055.21UniProt (P02359)
Pfam (PF00177)
In PDB		Escherichia coli30S ribosomal protein S7
8mSmall ribosomal subunit protein uS8polymer13014146.61UniProt (P0A7W7)
Pfam (PF00410)
In PDB		Escherichia coli30S ribosomal protein S8
9nSmall ribosomal subunit protein uS9polymer13014886.31UniProt (P0A7X3)
Pfam (PF00380)
In PDB		Escherichia coli30S ribosomal protein S9
10oSmall ribosomal subunit protein uS10polymer10311755.61UniProt (P0A7R5)
Pfam (PF00338)
In PDB		Escherichia coli30S ribosomal protein S10,Transcription termination/antitermination protein NusE
11pSmall ribosomal subunit protein uS11polymer12913872.01UniProt (P0A7R9)
Pfam (PF00411)
In PDB		Escherichia coli30S ribosomal protein S11
12qSmall ribosomal subunit protein uS12polymer12413814.21UniProt (P0A7S3)
Pfam (PF00164)
In PDB		Escherichia coli30S ribosomal protein S12
13rSmall ribosomal subunit protein uS13polymer11813128.51UniProt (P0A7S9)
Pfam (PF00416)
In PDB		Escherichia coli30S ribosomal protein S13
14sSmall ribosomal subunit protein uS14polymer10111606.61UniProt (P0AG59)
Pfam (PF00253)
In PDB		Escherichia coli30S ribosomal protein S14
15tSmall ribosomal subunit protein uS15polymer8910290.81UniProt (P0ADZ4)
Pfam (PF00312)
In PDB		Escherichia coli30S ribosomal protein S15
16uSmall ribosomal subunit protein bS16polymer829207.61UniProt (P0A7T3)
Pfam (PF00886)
In PDB		Escherichia coli30S ribosomal protein S16
17vSmall ribosomal subunit protein uS17polymer849724.51UniProt (P0AG63)
Pfam (PF00366)
In PDB		Escherichia coli30S ribosomal protein S17
18wSmall ribosomal subunit protein bS18polymer759005.51UniProt (P0A7T7)
Pfam (PF01084)
In PDB		Escherichia coli30S ribosomal protein S18
19xSmall ribosomal subunit protein uS19polymer9210455.41UniProt (P0A7U3)
Pfam (PF00203)
In PDB		Escherichia coli30S ribosomal protein S19
20ySmall ribosomal subunit protein bS20polymer879708.51UniProt (P0A7U7)
Pfam (PF01649)
In PDB		Escherichia coli30S ribosomal protein S20
21zSmall ribosomal subunit protein bS21polymer718524.01UniProt (P68679)
Pfam (PF01165)
In PDB		Escherichia coli30S ribosomal protein S21
224mRNApolymer4915772.41Escherichia coli
235tRNA(fMet)polymer7624497.61GenBank (1848851804)Escherichia coli
24123S rRNApolymer2904941811.61Escherichia coli
2535S rRNApolymer12038790.11GenBank (CP035706.1)Escherichia coli
26BLarge ribosomal subunit protein uL2polymer27329923.61UniProt (P60422)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Escherichia coli50S ribosomal protein L2
27CLarge ribosomal subunit protein uL3polymer20922291.61UniProt (P60438)
Pfam (PF00297)
In PDB		Escherichia coli50S ribosomal protein L3
28DLarge ribosomal subunit protein uL4polymer20122121.61UniProt (P60723)
Pfam (PF00573)
In PDB		Escherichia coli50S ribosomal protein L4
29ELarge ribosomal subunit protein uL5polymer17920333.61UniProt (P62399)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Escherichia coli50S ribosomal protein L5
30FLarge ribosomal subunit protein uL6polymer17718932.81UniProt (P0AG55)
Pfam (PF00347)
In PDB		Escherichia coli50S ribosomal protein L6
31JLarge ribosomal subunit protein uL13polymer14216050.61UniProt (P0AA10)
Pfam (PF00572)
In PDB		Escherichia coli50S ribosomal protein L13
32K50S ribosomal protein L14polymer12313565.11UniProt (P0ADY3)
Pfam (PF00238)
In PDB		Escherichia coliribosomal protein uL14
33L50S ribosomal protein L15polymer14415008.51UniProt (P02413)
Pfam (PF00828)
In PDB		Escherichia coliribosomal protein uL15
34MLarge ribosomal subunit protein uL16polymer13615329.31UniProt (P0ADY7)
Pfam (PF00252)
In PDB		Escherichia coli50S ribosomal protein L16
35N50S ribosomal protein L17polymer12714393.71UniProt (P0AG44)
Pfam (PF01196)
In PDB		Escherichia coliribosomal protein bL17
36O50S ribosomal protein L18polymer11712794.71UniProt (P0C018)
Pfam (PF00861)
In PDB		Escherichia coliribosomal protein uL18
37P50S ribosomal protein L19polymer11513159.31UniProt (P0A7K6)
Pfam (PF01245)
In PDB		Escherichia coliribosomal protein bL19
38Q50S ribosomal protein L20polymer11813528.01UniProt (P0A7L3)
Pfam (PF00453)
In PDB		Escherichia coliribosomal protein bL20
39R50S ribosomal protein L21polymer10311586.41UniProt (P0AG48)
Pfam (PF00829)
In PDB		Escherichia coliribosomal protein bL21
40S50S ribosomal protein L22polymer11012253.41UniProt (P61175)
Pfam (PF00237)
In PDB		Escherichia coliribosomal protein uL22
41T50S ribosomal protein L23polymer10011222.21UniProt (P0ADZ0)
Pfam (PF00276)
In PDB		Escherichia coliribosomal protein uL23
42U50S ribosomal protein L24polymer10411339.31UniProt (P60624)
Pfam (PF00467)
Pfam (PF17136)
In PDB		Escherichia coliribosomal protein uL24
43V50S ribosomal protein L25polymer9410713.51UniProt (P68919)
Pfam (PF01386)
In PDB		Escherichia coliribosomal protein bL25
44W50S ribosomal protein L27polymer859146.51UniProt (P0A7L8)
Pfam (PF01016)
In PDB		Escherichia coliLarge ribosomal subunit protein bL27
45X50S ribosomal protein L28polymer789027.61UniProt (P0A7M2)
Pfam (PF00830)
In PDB		Escherichia coliribosomal protein bL28
46Y50S ribosomal protein L29polymer637286.51UniProt (P0A7M6)
Pfam (PF00831)
In PDB		Escherichia coliribosomal protein uL29
47Z50S ribosomal protein L30polymer596554.81UniProt (P0AG51)
Pfam (PF00327)
In PDB		Escherichia coliribosomal protein uL30
48b50S ribosomal protein L32polymer576463.41UniProt (P0A7N4)
Pfam (PF01783)
In PDB		Escherichia coliribosomal protein bL32
49c50S ribosomal protein L33polymer556388.61UniProt (P0A7N9)
Pfam (PF00471)
In PDB		Escherichia coliribosomal protein bL33
50d50S ribosomal protein L34polymer465397.51UniProt (P0A7P5)
Pfam (PF00468)
In PDB		Escherichia coliribosomal protein bL34
51e50S ribosomal protein L35polymer657313.01UniProt (P0A7Q1)
Pfam (PF01632)
In PDB		Escherichia coliRibosomal protein A, ribosomal protein bL35
52f50S ribosomal protein L36polymer384377.41UniProt (P0A7Q6)
Pfam (PF00444)
In PDB		Escherichia coliRibosomal protein B, ribosomal protein bL36
53aLarge ribosomal subunit protein bL31Apolymer707887.11UniProt (P0A7M9)
Pfam (PF01197)
In PDB		Escherichia coli50S ribosomal protein L31
54ILarge ribosomal subunit protein uL11polymer14214894.41UniProt (P0A7J7)
Pfam (PF03946)
Pfam (PF00298)
In PDB		Escherichia coli50S ribosomal protein L11
556Peptide chain release factor RF2polymer36541314.81UniProt (P07012)
Pfam (PF03462)
Pfam (PF00472)
In PDB		Escherichia coli K-12
56GLarge ribosomal subunit protein bL9polymer14915789.01UniProt (P0A7R1)
Pfam (PF01281)
Pfam (PF03948)
In PDB		Escherichia coli50S ribosomal protein L9
572, 1, b, 5, 3...MAGNESIUM IONnon-polymer24.3332Chemie (MG)
581, 2, C1,4-DIAMINOBUTANEnon-polymer88.221Chemie (PUT)
592, 1POTASSIUM IONnon-polymer39.1126Chemie (K)
601SPERMIDINEnon-polymer145.210Chemie (SPD)
611SPERMINEnon-polymer202.32Chemie (SPM)
62f, aZINC IONnon-polymer65.42Chemie (ZN)
Sequence modifications
p: 1 - 129 (UniProt: P0A7R9)
PDBExternal DatabaseDetails
Ias 119Asn 119variant
M: 1 - 136 (UniProt: P0ADY7)
PDBExternal DatabaseDetails
Ms6 82Met 82variant
6: 1 - 365 (UniProt: P07012)
PDBExternal DatabaseDetails
Lys 167Glu 167engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains56
Total formula weight2236997.6
Non-Polymers*Number of molecules493
Total formula weight16834.7
All*Total formula weight2253832.4
*Water molecules are not included.

226262

PDB entries from 2024-10-16

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