8QHC
Cryo-EM structure of SidH from Legionella pneumophila in complex with LubX
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (C) | Elongation factor Tu | polymer | 394 | 43370.5 | 1 | UniProt (E2QJ06) Pfam (PF00009) Pfam (PF03144) Pfam (PF03143) UniProt (by SIFTS) (P0CE48) | Escherichia coli 'BL21-Gold(DE3)pLysS AG' | |
| 2 | B (B) | t-RNA | polymer | 76 | 24620.8 | 1 | Escherichia coli 'BL21-Gold(DE3)pLysS AG' | ||
| 3 | C (A) | Protein SidH | polymer | 2244 | 255113.7 | 1 | UniProt (Q6RCQ4) | Legionella pneumophila | |
| 4 | D (D) | E3 ubiquitin--protein ligase | polymer | 264 | 30506.8 | 1 | UniProt (A0A2S6F0E3) Pfam (PF04564) UniProt (by SIFTS) (Q5ZRQ0) | Legionella pneumophila | |
| 5 | E (C) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 6 | F (C) | GUANOSINE-5'-TRIPHOSPHATE | non-polymer | 523.2 | 1 | Chemie (GTP) |
Sequence modifications
A: 1 - 2225 (UniProt: Q6RCQ4)
D: 1 - 246 (UniProt: A0A2S6F0E3)
| PDB | External Database | Details |
|---|---|---|
| Met -18 | - | initiating methionine |
| Gly -17 | - | expression tag |
| Ser -16 | - | expression tag |
| Ser -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| His -10 | - | expression tag |
| His -9 | - | expression tag |
| Ser -8 | - | expression tag |
| Ser -7 | - | expression tag |
| Gly -6 | - | expression tag |
| Leu -5 | - | expression tag |
| Val -4 | - | expression tag |
| Pro -3 | - | expression tag |
| Arg -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met -17 | - | initiating methionine |
| His -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| His -11 | - | expression tag |
| Ser -10 | - | expression tag |
| Ala -9 | - | expression tag |
| Gly -8 | - | expression tag |
| Leu -7 | - | expression tag |
| Glu -6 | - | expression tag |
| Val -5 | - | expression tag |
| Leu -4 | - | expression tag |
| Phe -3 | - | expression tag |
| Gln -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Pro 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 353611.8 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 547.5 | |
| All* | Total formula weight | 354159.3 |
