8Q72
E. coli plasmid-borne JetABCD(E248A) core in a cleavage-competent state
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, F, G (A, B, F, G) | JetC | polymer | 1096 | 124562.9 | 4 | UniProt (A0A6D0I2P0) Pfam (PF13555) Pfam (PF13558) | Escherichia coli | |
| 2 | C, D, H, I (C, D, H, I) | JetB | polymer | 250 | 28020.4 | 4 | Pfam (PF13835) UniProt (by SIFTS) (A0A5F1WGW3) | Escherichia coli | |
| 3 | E, J (E, J) | JetA | polymer | 503 | 57818.9 | 2 | UniProt (A0A4V3QHV5) Pfam (PF11855) | Escherichia coli | |
| 4 | K, L (M, N) | JetD(E248A) | polymer | 390 | 43938.5 | 2 | UniProt (A0A3T6B0Z0) Pfam (PF11795) Pfam (PF09983) | Escherichia coli | |
| 5 | M, N, O, P (P, Q, R, S) | Circular plasmid DNA (1840-MER) | polymer | 40 | 12303.0 | 4 | Escherichia coli | ||
| 6 | Q, R, S, T (A, B, F, G) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 4 | Chemie (ADP) |
Sequence modifications
A, B, F, G: 1 - 1095 (UniProt: A0A6D0I2P0)
E, J: 1 - 498 (UniProt: A0A4V3QHV5)
M, N: 1 - 382 (UniProt: A0A3T6B0Z0)
| PDB | External Database | Details |
|---|---|---|
| Leu 283 | Gln 283 | conflict |
| Ser 298 | Asn 298 | conflict |
| Ser 386 | Ile 386 | conflict |
| Glu 398 | Ala 398 | conflict |
| Arg 400 | Leu 400 | conflict |
| His 576 | Arg 576 | conflict |
| Ala 625 | Thr 625 | conflict |
| Leu 647 | Ile 647 | conflict |
| Ile 705 | Val 705 | conflict |
| Leu 729 | Ser 729 | conflict |
| Ala 817 | Thr 817 | conflict |
| Pro 823 | Thr 823 | conflict |
| Asp 889 | Tyr 889 | conflict |
| Val 933 | Ile 933 | conflict |
| Gly 1096 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -3 | - | expression tag |
| Pro -2 | - | expression tag |
| Ala -1 | - | expression tag |
| Ala 0 | - | expression tag |
| Asp 187 | Glu 187 | conflict |
| Glu 435 | Ala 435 | engineered mutation |
| Gly 499 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Phe 74 | Tyr 74 | conflict |
| Ala 248 | Glu 248 | engineered mutation |
| Arg 358 | Cys 358 | conflict |
| Ala 374 | Val 374 | conflict |
| Gly 383 | - | expression tag |
| Ser 384 | - | expression tag |
| Leu 385 | - | expression tag |
| Glu 386 | - | expression tag |
| Val 387 | - | expression tag |
| Leu 388 | - | expression tag |
| Phe 389 | - | expression tag |
| Gln 390 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 16 |
| Total formula weight | 863060.4 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 1708.8 | |
| All* | Total formula weight | 864769.2 |
