8Q3K
The open state of the ASFV apo-RNA polymerase
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | DNA-directed RNA polymerase RPB1 homolog | polymer | 1450 | 163936.1 | 1 | UniProt (P42486) Pfam (PF04997) Pfam (PF00623) Pfam (PF04983) Pfam (PF05000) Pfam (PF04998) Pfam (PF04990) In PDB | African swine fever virus BA71V | RPB1 homolog |
2 | B | DNA-directed RNA polymerase RPB2 homolog | polymer | 1243 | 140119.4 | 1 | UniProt (P42487) Pfam (PF04566) Pfam (PF00562) Pfam (PF04560) Pfam (PF04563) Pfam (PF04561) Pfam (PF04565) In PDB | African swine fever virus BA71V | |
3 | C | DNA-directed RNA polymerase RPB3-11 homolog | polymer | 359 | 41352.0 | 1 | UniProt (Q65184) Pfam (PF13656) In PDB | African swine fever virus BA71V | |
4 | D | DNA-directed RNA polymerase RPB7 homolog | polymer | 339 | 38789.6 | 1 | UniProt (Q89907) In PDB | African swine fever virus BA71V | |
5 | E | DNA-directed RNA polymerase RPB5 homolog | polymer | 205 | 23693.7 | 1 | UniProt (Q65181) Pfam (PF01191) In PDB | African swine fever virus BA71V | |
6 | F | DNA-directed RNA polymerase RPB6 homolog | polymer | 147 | 16704.8 | 1 | UniProt (P42484) Pfam (PF01192) In PDB | African swine fever virus BA71V | |
7 | I | Uncharacterized protein C122R | polymer | 105 | 11831.9 | 1 | UniProt (Q65157) In PDB | African swine fever virus BA71V | |
8 | J | DNA-directed RNA polymerase RPB10 homolog | polymer | 80 | 9098.8 | 1 | UniProt (P42488) Pfam (PF01194) In PDB | African swine fever virus BA71V | |
9 | A, B, I, J | ZINC ION | non-polymer | 65.4 | 6 | Chemie (ZN) | |||
10 | A | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) |
Sequence modifications
B: 1 - 1242 (UniProt: P42487)
PDB | External Database | Details |
---|---|---|
Gly 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 8 |
Total formula weight | 445526.4 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 416.8 | |
All* | Total formula weight | 445943.1 |