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8PW6

C respirasome from murine liver

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, K
(A, L)
Cytochrome b-c1 complex subunit 1, mitochondrialpolymer48052910.62UniProt (Q9CZ13)
Pfam (PF00675)
Pfam (PF05193)
Mus musculus (house mouse)Complex III subunit 1,Core protein I,Ubiquinol-cytochrome-c reductase complex core protein 1
2B, L
(B, M)
Cytochrome b-c1 complex subunit 2, mitochondrialpolymer45348289.72UniProt (Q9DB77)
Pfam (PF00675)
Pfam (PF05193)
Mus musculus (house mouse)Complex III subunit 2,Core protein II,Ubiquinol-cytochrome-c reductase complex core protein 2
3C, M
(C, N)
Cytochrome bpolymer38143240.32UniProt (P00158)
Pfam (PF00033)
Pfam (PF00032)
Mus musculus (house mouse)Complex III subunit 3,Complex III subunit III,Cytochrome b-c1 complex subunit 3,Ubiquinol-cytochrome-c reductase complex cytochrome b subunit
4D, N
(D, O)
Cytochrome c1, heme protein, mitochondrialpolymer32535374.72UniProt (Q9D0M3)
Pfam (PF02167)
Mus musculus (house mouse)Complex III subunit 4,Complex III subunit IV,Cytochrome b-c1 complex subunit 4,Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit,Cytochrome c-1
5E, O, U
(E, P, T)
Cytochrome b-c1 complex subunit Rieske, mitochondrialpolymer27429406.63UniProt (Q9CR68)
Pfam (PF09165)
Pfam (PF02921)
Pfam (PF00355)
Mus musculus (house mouse)Complex III subunit 5,Cytochrome b-c1 complex subunit 5,Rieske iron-sulfur protein,RISP,Rieske protein UQCRFS1,Ubiquinol-cytochrome c reductase iron-sulfur subunit
6F, P
(F, Q)
Cytochrome b-c1 complex subunit 7polymer11113587.52UniProt (Q9CQB4)
Pfam (PF02271)
UniProt (by SIFTS) (Q9D855)
Mus musculus (house mouse)
7G, Q
(G, R)
Cytochrome b-c1 complex subunit 8polymer829783.22UniProt (Q9CQ69)
Pfam (PF02939)
Mus musculus (house mouse)Complex III subunit 8,Complex III subunit VIII,Ubiquinol-cytochrome c reductase complex 9.5 kDa protein,Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C
8H, R
(H, S)
Cytochrome b-c1 complex subunit 6, mitochondrialpolymer8910452.72UniProt (P99028)
Pfam (PF02320)
Mus musculus (house mouse)Complex III subunit 6,Complex III subunit VIII,Cytochrome c1 non-heme 11 kDa protein,Mitochondrial hinge protein,Ubiquinol-cytochrome c reductase complex 11 kDa protein
9I, S
(J, U)
Cytochrome b-c1 complex subunit 9polymer647457.52UniProt (Q8R1I1)
Pfam (PF05365)
Mus musculus (house mouse)Complex III subunit 9,Complex III subunit X,Cytochrome c1 non-heme 7 kDa protein,Ubiquinol-cytochrome c reductase complex 7.2 kDa protein
10J, T
(K, V)
Cytochrome b-c1 complex subunit 10polymer566546.62UniProt (Q9CPX8)
Pfam (PF08997)
Mus musculus (house mouse)Complex III subunit 10,Complex III subunit XI,Ubiquinol-cytochrome c reductase complex 6.4 kDa protein
11V
(n)
Cytochrome c oxidase subunit 1polymer51456945.61UniProt (P00397)
Pfam (PF00115)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide I
12W
(o)
Cytochrome c oxidase subunit 2polymer22725993.31UniProt (P00405)
Pfam (PF02790)
Pfam (PF00116)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide II
13X
(p)
Cytochrome c oxidase subunit 3polymer26129948.71UniProt (P00416)
Pfam (PF00510)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide III
14Y
(q)
Cytochrome c oxidase subunit 4 isoform 1, mitochondrialpolymer16919558.51UniProt (P19783)
Pfam (PF02936)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide IV,Cytochrome c oxidase subunit IV isoform 1,COX IV-1
15Z
(r)
Cytochrome c oxidase subunit 5A, mitochondrialpolymer14616123.51UniProt (P12787)
Pfam (PF02284)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide Va
16AA
(s)
Cytochrome c oxidase subunit 5B, mitochondrialpolymer12813831.91UniProt (P19536)
Pfam (PF01215)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide Vb
17BA
(t)
Cytochrome c oxidase subunit 6A1, mitochondrialpolymer11112372.11UniProt (P43024)
Pfam (PF02046)
UniProt (by SIFTS) (P43023)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide VIa-liver
18CA
(u)
Cytochrome c oxidase subunit 6B1polymer8610086.51UniProt (P56391)
Pfam (PF02297)
Mus musculus (house mouse)Cytochrome c oxidase subunit VIb isoform 1,COX VIb-1
19DA
(v)
Cytochrome c oxidase subunit 6Cpolymer768484.01UniProt (Q9CPQ1)
Pfam (PF02937)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide VIc
20EA
(x)
Cytochrome c oxidase subunit 7B, mitochondrialpolymer809023.41UniProt (P56393)
Pfam (PF05392)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide VIIb
21FA
(y)
Cytochrome c oxidase subunit 7C, mitochondrialpolymer637344.61UniProt (P17665)
Pfam (PF02935)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide VIIc
22GA
(z)
Cytochrome c oxidase subunit 8A, mitochondrialpolymer697659.21UniProt (Q64445)
Pfam (PF02285)
UniProt (by SIFTS) (P48772)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide VIII-liver,Cytochrome c oxidase subunit 8-2
23HA
(w)
Cytochrome c oxidase subunit 7A2, mitochondrialpolymer839304.91UniProt (P48771)
Pfam (PF02238)
Mus musculus (house mouse)Cytochrome c oxidase subunit VIIa-liver/heart,Cytochrome c oxidase subunit VIIa-L
24IA
(6)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrialpolymer22424715.91UniProt (Q9DC70)
Pfam (PF01058)
Mus musculus (house mouse)Complex I-20kD,CI-20kD,NADH-ubiquinone oxidoreductase 20 kDa subunit
25JA
(C1)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrialpolymer26330191.31UniProt (Q9DCT2)
Pfam (PF00329)
Mus musculus (house mouse)Complex I-30kD,CI-30kD,NADH-ubiquinone oxidoreductase 30 kDa subunit
26KA
(D1)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrialpolymer46352720.61UniProt (Q91WD5)
Pfam (PF00346)
Mus musculus (house mouse)Complex I-49kD,CI-49kD,NADH-ubiquinone oxidoreductase 49 kDa subunit
27LA
(2)
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrialpolymer24827318.31UniProt (Q9D6J6)
Pfam (PF01257)
Mus musculus (house mouse)NADH-ubiquinone oxidoreductase 24 kDa subunit
28MA
(1)
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrialpolymer46450904.21UniProt (Q91YT0)
Pfam (PF01512)
Pfam (PF22461)
Pfam (PF10589)
Mus musculus (house mouse)Complex I-51kD,CI-51kD,NADH-ubiquinone oxidoreductase 51 kDa subunit
29NA
(3)
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrialpolymer72779866.71UniProt (Q91VD9)
Pfam (PF09326)
Pfam (PF13510)
Pfam (PF10588)
Pfam (PF22117)
Pfam (PF22151)
Pfam (PF00384)
Mus musculus (house mouse)Complex I-75kD,CI-75kD
30OA
(9)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrialpolymer21224068.41UniProt (Q8K3J1)
Pfam (PF12838)
Mus musculus (house mouse)Complex I-23kD,CI-23kD,NADH-ubiquinone oxidoreductase 23 kDa subunit
31PA
(P1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrialpolymer37742588.11UniProt (Q9DC69)
Pfam (PF05368)
Mus musculus (house mouse)Complex I-39kD,CI-39kD,NADH-ubiquinone oxidoreductase 39 kDa subunit
32QA
(Q1)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrialpolymer17519814.71UniProt (Q9CXZ1)
Pfam (PF04800)
Mus musculus (house mouse)Complex I-18 kDa,CI-18 kDa,Complex I-AQDQ,CI-AQDQ,NADH-ubiquinone oxidoreductase 18 kDa subunit
33RA
(7)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrialpolymer11613041.81UniProt (P52503)
Pfam (PF10276)
Mus musculus (house mouse)Complex I-13kD-A,CI-13kD-A,NADH-ubiquinone oxidoreductase 13 kDa-A subunit
34SA
(S1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2polymer9910932.71UniProt (Q9CQ75)
Pfam (PF05047)
Mus musculus (house mouse)Complex I-B8,CI-B8,NADH-ubiquinone oxidoreductase B8 subunit
35HB, TA
(T1, U1)
Acyl carrier protein, mitochondrialpolymer15617390.32UniProt (Q9CR21)
Pfam (PF00550)
Mus musculus (house mouse)ACP,CI-SDAP,NADH-ubiquinone oxidoreductase 9.6 kDa subunit
36UA
(V1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5polymer11613380.71UniProt (Q9CPP6)
Pfam (PF04716)
Mus musculus (house mouse)Complex I subunit B13,Complex I-13kD-B,CI-13kD-B,NADH-ubiquinone oxidoreductase 13 kDa-B subunit
37VA
(W1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6polymer13115311.91UniProt (Q9CQZ5)
Pfam (PF13233)
Mus musculus (house mouse)Complex I-B14,CI-B14,NADH-ubiquinone oxidoreductase B14 subunit
38WA
(q1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12polymer14517112.41UniProt (Q7TMF3)
Pfam (PF05071)
Mus musculus (house mouse)Complex I-B17.2,CI-B17.2,CIB17.2,NADH-ubiquinone oxidoreductase subunit B17.2
39XA
(r1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7polymer11312637.61UniProt (Q9Z1P6)
Pfam (PF07347)
Mus musculus (house mouse)Complex I-B14.5a,CI-B14.5a,NADH-ubiquinone oxidoreductase subunit B14.5a
40YA
(s1)
NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrialpolymer10411833.51UniProt (Q8BK30)
Pfam (PF15880)
Mus musculus (house mouse)Complex I-9kD,CI-9kD,NADH-ubiquinone oxidoreductase 9 kDa subunit
41ZA
(A1)
NADH-ubiquinone oxidoreductase chain 3polymer11513251.81UniProt (P03899)
Pfam (PF00507)
Mus musculus (house mouse)NADH dehydrogenase subunit 3
42AB
(H1)
NADH-ubiquinone oxidoreductase chain 1polymer31836105.01UniProt (P03888)
Pfam (PF00146)
Mus musculus (house mouse)NADH dehydrogenase subunit 1
43BB
(J1)
NADH-ubiquinone oxidoreductase chain 6polymer17218656.11UniProt (P03925)
Pfam (PF00499)
Mus musculus (house mouse)NADH dehydrogenase subunit 6
44CB
(K1)
NADH-ubiquinone oxidoreductase chain 4Lpolymer9810637.61UniProt (P03903)
Pfam (PF00420)
Mus musculus (house mouse)NADH dehydrogenase subunit 4L
45DB
(L1)
NADH-ubiquinone oxidoreductase chain 5polymer60768547.31UniProt (P03921)
Pfam (PF00662)
Pfam (PF00361)
Pfam (PF06455)
Mus musculus (house mouse)NADH dehydrogenase subunit 5
46EB
(M1)
NADH-ubiquinone oxidoreductase chain 4polymer45951943.51UniProt (P03911)
Pfam (PF01059)
Pfam (PF00361)
Mus musculus (house mouse)NADH dehydrogenase subunit 4
47FB
(N1)
NADH-ubiquinone oxidoreductase chain 2polymer34538800.21UniProt (P03893)
Pfam (PF00361)
Pfam (PF06444)
Mus musculus (house mouse)NADH dehydrogenase subunit 2
48GB
(O1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrialpolymer35540657.41UniProt (Q99LC3)
Pfam (PF01712)
Mus musculus (house mouse)Complex I-42kD,CI-42kD,NADH-ubiquinone oxidoreductase 42 kDa subunit
49IB
(X1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8polymer17220025.11UniProt (Q9DCJ5)
Pfam (PF06747)
Mus musculus (house mouse)Complex I-19kD,CI-19kD,Complex I-PGIV,CI-PGIV,NADH-ubiquinone oxidoreductase 19 kDa subunit
50JB
(Y1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11polymer14114928.11UniProt (G5E814)
Pfam (PF02466)
UniProt (by SIFTS) (Q9D8B4)
Mus musculus (house mouse)Complex I-B14.7,NADH-ubiquinone oxidoreductase subunit B14.7
51KB
(Z1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13polymer14416881.61UniProt (Q9ERS2)
Pfam (PF06212)
Mus musculus (house mouse)Cell death regulatory protein GRIM-19,Complex I-B16.6,CI-B16.6,Gene associated with retinoic and interferon-induced mortality 19 protein,Gene associated with retinoic and IFN-induced mortality 19 protein,NADH-ubiquinone oxidoreductase B16.6 subunit
52LB
(a1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1polymer708149.51UniProt (O35683)
Pfam (PF15879)
Mus musculus (house mouse)Complex I-MWFE,CI-MWFE,NADH-ubiquinone oxidoreductase MWFE subunit
53MB
(b1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3polymer849380.91UniProt (Q9CQ91)
Pfam (PF14987)
Mus musculus (house mouse)Complex I-B9,CI-B9,NADH-ubiquinone oxidoreductase B9 subunit
54NB
(c1)
NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrialpolymer768636.01UniProt (Q9CQY9)
Pfam (PF15088)
Mus musculus (house mouse)Complex I-KFYI,CI-KFYI,NADH-ubiquinone oxidoreductase KFYI subunit
55OB
(d1)
NADH dehydrogenase [ubiquinone] 1 subunit C2polymer12014185.71UniProt (Q9CQ54)
Pfam (PF06374)
Mus musculus (house mouse)Complex I-B14.5b,CI-B14.5b,NADH-ubiquinone oxidoreductase subunit B14.5b
56PB
(e1)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5polymer10612675.81UniProt (Q99LY9)
Pfam (PF10200)
Mus musculus (house mouse)Complex I-15 kDa,CI-15 kDa,NADH-ubiquinone oxidoreductase 15 kDa subunit
57QB
(f1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1polymer576965.11UniProt (P0DN34)
Pfam (PF08040)
Mus musculus (house mouse)Complex I-MNLL,CI-MNLL,NADH-ubiquinone oxidoreductase MNLL subunit
58RB
(g1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrialpolymer15117463.71UniProt (O09111)
Pfam (PF10183)
Mus musculus (house mouse)Complex I-ESSS,CI-ESSS,NADH-ubiquinone oxidoreductase ESSS subunit,Neuronal protein 15.6,p15.6
59SB
(h1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrialpolymer18921742.21UniProt (Q9CQH3)
Pfam (PF09781)
Mus musculus (house mouse)Complex I-SGDH,CI-SGDH,NADH-ubiquinone oxidoreductase SGDH subunit
60TB
(i1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6polymer12815582.11UniProt (Q3UIU2)
Pfam (PF09782)
Mus musculus (house mouse)Complex I-B17,CI-B17,NADH-ubiquinone oxidoreductase B17 subunit
61UB
(j1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrialpolymer10511982.41UniProt (Q9CPU2)
Pfam (PF14813)
Mus musculus (house mouse)Complex I-AGGG,CI-AGGG,NADH-ubiquinone oxidoreductase AGGG subunit
62VB
(k1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3polymer10411714.21UniProt (Q9CQZ6)
Pfam (PF08122)
Mus musculus (house mouse)Complex I-B12,CI-B12,NADH-ubiquinone oxidoreductase B12 subunit
63WB
(l1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrialpolymer18621903.81UniProt (Q9D6J5)
Pfam (PF05821)
Mus musculus (house mouse)Complex I-ASHI,CI-ASHI,NADH-ubiquinone oxidoreductase ASHI subunit
64XB
(m1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4polymer12915105.31UniProt (Q9CQC7)
Pfam (PF07225)
Mus musculus (house mouse)Complex I-B15,CI-B15,NADH-ubiquinone oxidoreductase B15 subunit
65YB
(n1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9polymer17922020.11UniProt (Q9CQJ8)
Pfam (PF05347)
Mus musculus (house mouse)Complex I-B22,CI-B22,NADH-ubiquinone oxidoreductase B22 subunit
66ZB
(o1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7polymer13716360.81UniProt (Q9CR61)
Pfam (PF05676)
Mus musculus (house mouse)Complex I-B18,CI-B18,NADH-ubiquinone oxidoreductase B18 subunit
67AC
(p1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10polymer17621054.81UniProt (Q9DCS9)
Pfam (PF10249)
Mus musculus (house mouse)Complex I-PDSW,CI-PDSW,NADH-ubiquinone oxidoreductase PDSW subunit
68BC, BD, BF, FC, FF...
(A, R, N1, C, Y1...)
1,2-Distearoyl-sn-glycerophosphoethanolaminenon-polymer748.133Chemie (3PE)
69AD, AF, CC, EF, GC...
(R, N1, A, Y1, C...)
CARDIOLIPINnon-polymer1464.016Chemie (CDL)
70DC, EC, SC, TC
(C, N)
PROTOPORPHYRIN IX CONTAINING FEnon-polymer616.54Chemie (HEM)
71JC, VC
(D, O)
HEME Cnon-polymer618.52Chemie (HEC)
72AE, FE, LC, XC
(2, 3, E, P)
FE2/S2 (INORGANIC) CLUSTERnon-polymer175.84Chemie (FES)
73CD, JE, KE, MC, NC...
(V, 9, E, K, p...)
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEnon-polymer790.112Chemie (PC1)
74DD
(n)
COPPER (II) IONnon-polymer63.51Chemie (CU)
75ED
(n)
SODIUM IONnon-polymer23.01Chemie (NA)
76FD, GD
(n)
HEME-Anon-polymer852.82Chemie (HEA)
77DF, JD
(O1, o)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
78LD
(o)
DINUCLEAR COPPER IONnon-polymer127.11Chemie (CUA)
79ME, PD
(7, s)
ZINC IONnon-polymer65.42Chemie (ZN)
80TD
(y)
TRISTEAROYLGLYCEROLnon-polymer891.51Chemie (TGL)
81CE, DE, EE, HE, IE...
(1, 3, 9, 6)
IRON/SULFUR CLUSTERnon-polymer351.66Chemie (SF4)
82BE
(1)
FLAVIN MONONUCLEOTIDEnon-polymer456.31Chemie (FMN)
83GE
(3)
POTASSIUM IONnon-polymer39.11Chemie (K)
84LE
(P1)
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATEnon-polymer745.41Chemie (NDP)
85NE, PF
(W1, n1)
S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioatenon-polymer568.72Chemie (ZMP)
86CF
(O1)
2'-DEOXYGUANOSINE-5'-TRIPHOSPHATEnon-polymer507.21Chemie (DGT)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains79
Total formula weight1816757.8
Non-Polymers*Number of molecules93
Total formula weight69984.3
All*Total formula weight1886742.1
*Water molecules are not included.

237735

PDB entries from 2025-06-18

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