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8PW6

C respirasome from murine liver

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, K
(A, L)
Cytochrome b-c1 complex subunit 1, mitochondrialpolymer48052910.62UniProt (Q9CZ13)
Pfam (PF00675)
Pfam (PF05193)
Mus musculus (house mouse)Complex III subunit 1,Core protein I,Ubiquinol-cytochrome-c reductase complex core protein 1
2B, L
(B, M)
Cytochrome b-c1 complex subunit 2, mitochondrialpolymer45348289.72UniProt (Q9DB77)
Pfam (PF00675)
Pfam (PF05193)
Mus musculus (house mouse)Complex III subunit 2,Core protein II,Ubiquinol-cytochrome-c reductase complex core protein 2
3C, M
(C, N)
Cytochrome bpolymer38143240.32UniProt (P00158)
Pfam (PF00033)
Pfam (PF00032)
Mus musculus (house mouse)Complex III subunit 3,Complex III subunit III,Cytochrome b-c1 complex subunit 3,Ubiquinol-cytochrome-c reductase complex cytochrome b subunit
4D, N
(D, O)
Cytochrome c1, heme protein, mitochondrialpolymer32535374.72UniProt (Q9D0M3)
Pfam (PF02167)
Mus musculus (house mouse)Complex III subunit 4,Complex III subunit IV,Cytochrome b-c1 complex subunit 4,Ubiquinol-cytochrome-c reductase complex cytochrome c1 subunit,Cytochrome c-1
5E, O, U
(E, P, T)
Cytochrome b-c1 complex subunit Rieske, mitochondrialpolymer27429406.63UniProt (Q9CR68)
Pfam (PF09165)
Pfam (PF02921)
Pfam (PF00355)
Mus musculus (house mouse)Complex III subunit 5,Cytochrome b-c1 complex subunit 5,Rieske iron-sulfur protein,RISP,Rieske protein UQCRFS1,Ubiquinol-cytochrome c reductase iron-sulfur subunit
6F, P
(F, Q)
Cytochrome b-c1 complex subunit 7polymer11113587.52UniProt (Q9CQB4)
Pfam (PF02271)
UniProt (by SIFTS) (Q9D855)
Mus musculus (house mouse)
7G, Q
(G, R)
Cytochrome b-c1 complex subunit 8polymer829783.22UniProt (Q9CQ69)
Pfam (PF02939)
Mus musculus (house mouse)Complex III subunit 8,Complex III subunit VIII,Ubiquinol-cytochrome c reductase complex 9.5 kDa protein,Ubiquinol-cytochrome c reductase complex ubiquinone-binding protein QP-C
8H, R
(H, S)
Cytochrome b-c1 complex subunit 6, mitochondrialpolymer8910452.72UniProt (P99028)
Pfam (PF02320)
Mus musculus (house mouse)Complex III subunit 6,Complex III subunit VIII,Cytochrome c1 non-heme 11 kDa protein,Mitochondrial hinge protein,Ubiquinol-cytochrome c reductase complex 11 kDa protein
9I, S
(J, U)
Cytochrome b-c1 complex subunit 9polymer647457.52UniProt (Q8R1I1)
Pfam (PF05365)
Mus musculus (house mouse)Complex III subunit 9,Complex III subunit X,Cytochrome c1 non-heme 7 kDa protein,Ubiquinol-cytochrome c reductase complex 7.2 kDa protein
10J, T
(K, V)
Cytochrome b-c1 complex subunit 10polymer566546.62UniProt (Q9CPX8)
Pfam (PF08997)
Mus musculus (house mouse)Complex III subunit 10,Complex III subunit XI,Ubiquinol-cytochrome c reductase complex 6.4 kDa protein
11V
(n)
Cytochrome c oxidase subunit 1polymer51456945.61UniProt (P00397)
Pfam (PF00115)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide I
12W
(o)
Cytochrome c oxidase subunit 2polymer22725993.31UniProt (P00405)
Pfam (PF02790)
Pfam (PF00116)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide II
13X
(p)
Cytochrome c oxidase subunit 3polymer26129948.71UniProt (P00416)
Pfam (PF00510)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide III
14Y
(q)
Cytochrome c oxidase subunit 4 isoform 1, mitochondrialpolymer16919558.51UniProt (P19783)
Pfam (PF02936)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide IV,Cytochrome c oxidase subunit IV isoform 1,COX IV-1
15Z
(r)
Cytochrome c oxidase subunit 5A, mitochondrialpolymer14616123.51UniProt (P12787)
Pfam (PF02284)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide Va
16AA
(s)
Cytochrome c oxidase subunit 5B, mitochondrialpolymer12813831.91UniProt (P19536)
Pfam (PF01215)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide Vb
17BA
(t)
Cytochrome c oxidase subunit 6A1, mitochondrialpolymer11112372.11UniProt (P43024)
Pfam (PF02046)
UniProt (by SIFTS) (P43023)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide VIa-liver
18CA
(u)
Cytochrome c oxidase subunit 6B1polymer8610086.51UniProt (P56391)
Pfam (PF02297)
Mus musculus (house mouse)Cytochrome c oxidase subunit VIb isoform 1,COX VIb-1
19DA
(v)
Cytochrome c oxidase subunit 6Cpolymer768484.01UniProt (Q9CPQ1)
Pfam (PF02937)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide VIc
20EA
(x)
Cytochrome c oxidase subunit 7B, mitochondrialpolymer809023.41UniProt (P56393)
Pfam (PF05392)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide VIIb
21FA
(y)
Cytochrome c oxidase subunit 7C, mitochondrialpolymer637344.61UniProt (P17665)
Pfam (PF02935)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide VIIc
22GA
(z)
Cytochrome c oxidase subunit 8A, mitochondrialpolymer697659.21UniProt (Q64445)
Pfam (PF02285)
UniProt (by SIFTS) (P48772)
Mus musculus (house mouse)Cytochrome c oxidase polypeptide VIII-liver,Cytochrome c oxidase subunit 8-2
23HA
(w)
Cytochrome c oxidase subunit 7A2, mitochondrialpolymer839304.91UniProt (P48771)
Pfam (PF02238)
Mus musculus (house mouse)Cytochrome c oxidase subunit VIIa-liver/heart,Cytochrome c oxidase subunit VIIa-L
24IA
(6)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrialpolymer22424715.91UniProt (Q9DC70)
Pfam (PF01058)
Mus musculus (house mouse)Complex I-20kD,CI-20kD,NADH-ubiquinone oxidoreductase 20 kDa subunit
25JA
(C1)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrialpolymer26330191.31UniProt (Q9DCT2)
Pfam (PF00329)
Mus musculus (house mouse)Complex I-30kD,CI-30kD,NADH-ubiquinone oxidoreductase 30 kDa subunit
26KA
(D1)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrialpolymer46352720.61UniProt (Q91WD5)
Pfam (PF00346)
Mus musculus (house mouse)Complex I-49kD,CI-49kD,NADH-ubiquinone oxidoreductase 49 kDa subunit
27LA
(2)
NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrialpolymer24827318.31UniProt (Q9D6J6)
Pfam (PF01257)
Mus musculus (house mouse)NADH-ubiquinone oxidoreductase 24 kDa subunit
28MA
(1)
NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrialpolymer46450904.21UniProt (Q91YT0)
Pfam (PF01512)
Pfam (PF22461)
Pfam (PF10589)
Mus musculus (house mouse)Complex I-51kD,CI-51kD,NADH-ubiquinone oxidoreductase 51 kDa subunit
29NA
(3)
NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrialpolymer72779866.71UniProt (Q91VD9)
Pfam (PF09326)
Pfam (PF13510)
Pfam (PF10588)
Pfam (PF22117)
Pfam (PF22151)
Pfam (PF00384)
Mus musculus (house mouse)Complex I-75kD,CI-75kD
30OA
(9)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrialpolymer21224068.41UniProt (Q8K3J1)
Pfam (PF12838)
Mus musculus (house mouse)Complex I-23kD,CI-23kD,NADH-ubiquinone oxidoreductase 23 kDa subunit
31PA
(P1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrialpolymer37742588.11UniProt (Q9DC69)
Pfam (PF05368)
Mus musculus (house mouse)Complex I-39kD,CI-39kD,NADH-ubiquinone oxidoreductase 39 kDa subunit
32QA
(Q1)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrialpolymer17519814.71UniProt (Q9CXZ1)
Pfam (PF04800)
Mus musculus (house mouse)Complex I-18 kDa,CI-18 kDa,Complex I-AQDQ,CI-AQDQ,NADH-ubiquinone oxidoreductase 18 kDa subunit
33RA
(7)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrialpolymer11613041.81UniProt (P52503)
Pfam (PF10276)
Mus musculus (house mouse)Complex I-13kD-A,CI-13kD-A,NADH-ubiquinone oxidoreductase 13 kDa-A subunit
34SA
(S1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2polymer9910932.71UniProt (Q9CQ75)
Pfam (PF05047)
Mus musculus (house mouse)Complex I-B8,CI-B8,NADH-ubiquinone oxidoreductase B8 subunit
35HB, TA
(T1, U1)
Acyl carrier protein, mitochondrialpolymer15617390.32UniProt (Q9CR21)
Pfam (PF00550)
Mus musculus (house mouse)ACP,CI-SDAP,NADH-ubiquinone oxidoreductase 9.6 kDa subunit
36UA
(V1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5polymer11613380.71UniProt (Q9CPP6)
Pfam (PF04716)
Mus musculus (house mouse)Complex I subunit B13,Complex I-13kD-B,CI-13kD-B,NADH-ubiquinone oxidoreductase 13 kDa-B subunit
37VA
(W1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6polymer13115311.91UniProt (Q9CQZ5)
Pfam (PF13233)
Mus musculus (house mouse)Complex I-B14,CI-B14,NADH-ubiquinone oxidoreductase B14 subunit
38WA
(q1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12polymer14517112.41UniProt (Q7TMF3)
Pfam (PF05071)
Mus musculus (house mouse)Complex I-B17.2,CI-B17.2,CIB17.2,NADH-ubiquinone oxidoreductase subunit B17.2
39XA
(r1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7polymer11312637.61UniProt (Q9Z1P6)
Pfam (PF07347)
Mus musculus (house mouse)Complex I-B14.5a,CI-B14.5a,NADH-ubiquinone oxidoreductase subunit B14.5a
40YA
(s1)
NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrialpolymer10411833.51UniProt (Q8BK30)
Pfam (PF15880)
Mus musculus (house mouse)Complex I-9kD,CI-9kD,NADH-ubiquinone oxidoreductase 9 kDa subunit
41ZA
(A1)
NADH-ubiquinone oxidoreductase chain 3polymer11513251.81UniProt (P03899)
Pfam (PF00507)
Mus musculus (house mouse)NADH dehydrogenase subunit 3
42AB
(H1)
NADH-ubiquinone oxidoreductase chain 1polymer31836105.01UniProt (P03888)
Pfam (PF00146)
Mus musculus (house mouse)NADH dehydrogenase subunit 1
43BB
(J1)
NADH-ubiquinone oxidoreductase chain 6polymer17218656.11UniProt (P03925)
Pfam (PF00499)
Mus musculus (house mouse)NADH dehydrogenase subunit 6
44CB
(K1)
NADH-ubiquinone oxidoreductase chain 4Lpolymer9810637.61UniProt (P03903)
Pfam (PF00420)
Mus musculus (house mouse)NADH dehydrogenase subunit 4L
45DB
(L1)
NADH-ubiquinone oxidoreductase chain 5polymer60768547.31UniProt (P03921)
Pfam (PF00662)
Pfam (PF00361)
Pfam (PF06455)
Mus musculus (house mouse)NADH dehydrogenase subunit 5
46EB
(M1)
NADH-ubiquinone oxidoreductase chain 4polymer45951943.51UniProt (P03911)
Pfam (PF01059)
Pfam (PF00361)
Mus musculus (house mouse)NADH dehydrogenase subunit 4
47FB
(N1)
NADH-ubiquinone oxidoreductase chain 2polymer34538800.21UniProt (P03893)
Pfam (PF00361)
Pfam (PF06444)
Mus musculus (house mouse)NADH dehydrogenase subunit 2
48GB
(O1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrialpolymer35540657.41UniProt (Q99LC3)
Pfam (PF01712)
Mus musculus (house mouse)Complex I-42kD,CI-42kD,NADH-ubiquinone oxidoreductase 42 kDa subunit
49IB
(X1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8polymer17220025.11UniProt (Q9DCJ5)
Pfam (PF06747)
Mus musculus (house mouse)Complex I-19kD,CI-19kD,Complex I-PGIV,CI-PGIV,NADH-ubiquinone oxidoreductase 19 kDa subunit
50JB
(Y1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11polymer14114928.11UniProt (G5E814)
Pfam (PF02466)
UniProt (by SIFTS) (Q9D8B4)
Mus musculus (house mouse)Complex I-B14.7,NADH-ubiquinone oxidoreductase subunit B14.7
51KB
(Z1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13polymer14416881.61UniProt (Q9ERS2)
Pfam (PF06212)
Mus musculus (house mouse)Cell death regulatory protein GRIM-19,Complex I-B16.6,CI-B16.6,Gene associated with retinoic and interferon-induced mortality 19 protein,Gene associated with retinoic and IFN-induced mortality 19 protein,NADH-ubiquinone oxidoreductase B16.6 subunit
52LB
(a1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1polymer708149.51UniProt (O35683)
Pfam (PF15879)
Mus musculus (house mouse)Complex I-MWFE,CI-MWFE,NADH-ubiquinone oxidoreductase MWFE subunit
53MB
(b1)
NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3polymer849380.91UniProt (Q9CQ91)
Pfam (PF14987)
Mus musculus (house mouse)Complex I-B9,CI-B9,NADH-ubiquinone oxidoreductase B9 subunit
54NB
(c1)
NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrialpolymer768636.01UniProt (Q9CQY9)
Pfam (PF15088)
Mus musculus (house mouse)Complex I-KFYI,CI-KFYI,NADH-ubiquinone oxidoreductase KFYI subunit
55OB
(d1)
NADH dehydrogenase [ubiquinone] 1 subunit C2polymer12014185.71UniProt (Q9CQ54)
Pfam (PF06374)
Mus musculus (house mouse)Complex I-B14.5b,CI-B14.5b,NADH-ubiquinone oxidoreductase subunit B14.5b
56PB
(e1)
NADH dehydrogenase [ubiquinone] iron-sulfur protein 5polymer10612675.81UniProt (Q99LY9)
Pfam (PF10200)
Mus musculus (house mouse)Complex I-15 kDa,CI-15 kDa,NADH-ubiquinone oxidoreductase 15 kDa subunit
57QB
(f1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1polymer576965.11UniProt (P0DN34)
Pfam (PF08040)
Mus musculus (house mouse)Complex I-MNLL,CI-MNLL,NADH-ubiquinone oxidoreductase MNLL subunit
58RB
(g1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrialpolymer15117463.71UniProt (O09111)
Pfam (PF10183)
Mus musculus (house mouse)Complex I-ESSS,CI-ESSS,NADH-ubiquinone oxidoreductase ESSS subunit,Neuronal protein 15.6,p15.6
59SB
(h1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrialpolymer18921742.21UniProt (Q9CQH3)
Pfam (PF09781)
Mus musculus (house mouse)Complex I-SGDH,CI-SGDH,NADH-ubiquinone oxidoreductase SGDH subunit
60TB
(i1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6polymer12815582.11UniProt (Q3UIU2)
Pfam (PF09782)
Mus musculus (house mouse)Complex I-B17,CI-B17,NADH-ubiquinone oxidoreductase B17 subunit
61UB
(j1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrialpolymer10511982.41UniProt (Q9CPU2)
Pfam (PF14813)
Mus musculus (house mouse)Complex I-AGGG,CI-AGGG,NADH-ubiquinone oxidoreductase AGGG subunit
62VB
(k1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3polymer10411714.21UniProt (Q9CQZ6)
Pfam (PF08122)
Mus musculus (house mouse)Complex I-B12,CI-B12,NADH-ubiquinone oxidoreductase B12 subunit
63WB
(l1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrialpolymer18621903.81UniProt (Q9D6J5)
Pfam (PF05821)
Mus musculus (house mouse)Complex I-ASHI,CI-ASHI,NADH-ubiquinone oxidoreductase ASHI subunit
64XB
(m1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4polymer12915105.31UniProt (Q9CQC7)
Pfam (PF07225)
Mus musculus (house mouse)Complex I-B15,CI-B15,NADH-ubiquinone oxidoreductase B15 subunit
65YB
(n1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9polymer17922020.11UniProt (Q9CQJ8)
Pfam (PF05347)
Mus musculus (house mouse)Complex I-B22,CI-B22,NADH-ubiquinone oxidoreductase B22 subunit
66ZB
(o1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7polymer13716360.81UniProt (Q9CR61)
Pfam (PF05676)
Mus musculus (house mouse)Complex I-B18,CI-B18,NADH-ubiquinone oxidoreductase B18 subunit
67AC
(p1)
NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10polymer17621054.81UniProt (Q9DCS9)
Pfam (PF10249)
Mus musculus (house mouse)Complex I-PDSW,CI-PDSW,NADH-ubiquinone oxidoreductase PDSW subunit
68BC, BD, BF, FC, FF...
(A, R, N1, C, Y1...)
1,2-Distearoyl-sn-glycerophosphoethanolaminenon-polymer748.133Chemie (3PE)
69AD, AF, CC, EF, GC...
(R, N1, A, Y1, C...)
CARDIOLIPINnon-polymer1464.016Chemie (CDL)
PubChem (17753886)
PubChem (5287898)
70DC, EC, SC, TC
(C, N)
PROTOPORPHYRIN IX CONTAINING FEnon-polymer616.54Chemie (HEM)
71JC, VC
(D, O)
HEME Cnon-polymer618.52Chemie (HEC)
72AE, FE, LC, XC
(2, 3, E, P)
FE2/S2 (INORGANIC) CLUSTERnon-polymer175.84Chemie (FES)
73CD, JE, KE, MC, NC...
(V, 9, E, K, p...)
1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINEnon-polymer790.112Chemie (PC1)
PubChem (65146)
PubChem (94190)
PubChem (10417837)
74DD
(n)
COPPER (II) IONnon-polymer63.51Chemie (CU)
PubChem (27099)
75ED
(n)
SODIUM IONnon-polymer23.01Chemie (NA)
PubChem (923)
76FD, GD
(n)
HEME-Anon-polymer852.82Chemie (HEA)
77DF, JD
(O1, o)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
PubChem (888)
78LD
(o)
DINUCLEAR COPPER IONnon-polymer127.11Chemie (CUA)
79ME, PD
(7, s)
ZINC IONnon-polymer65.42Chemie (ZN)
80TD
(y)
TRISTEAROYLGLYCEROLnon-polymer891.51Chemie (TGL)
PubChem (11146)
81CE, DE, EE, HE, IE...
(1, 3, 9, 6)
IRON/SULFUR CLUSTERnon-polymer351.66Chemie (SF4)
82BE
(1)
FLAVIN MONONUCLEOTIDEnon-polymer456.31Chemie (FMN)
PubChem (710)
PubChem (23585816)
PubChem (8965)
PubChem (51435500)
PubChem (51435503)
PubChem (643976)
PubChem (5702760)
PubChem (7048779)
PubChem (7048781)
PubChem (15559251)
83GE
(3)
POTASSIUM IONnon-polymer39.11Chemie (K)
PubChem (813)
84LE
(P1)
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATEnon-polymer745.41Chemie (NDP)
85NE, PF
(W1, n1)
S-[2-({N-[(2S)-2-hydroxy-3,3-dimethyl-4-(phosphonooxy)butanoyl]-beta-alanyl}amino)ethyl] tetradecanethioatenon-polymer568.72Chemie (ZMP)
PubChem (24941266)
PubChem (74369227)
PubChem (119058172)
86CF
(O1)
2'-DEOXYGUANOSINE-5'-TRIPHOSPHATEnon-polymer507.21Chemie (DGT)
PubChem (177678918)
PubChem (136110594)
PubChem (135398599)
PubChem (135402022)
PubChem (135566345)
PubChem (136254580)
PubChem (136633653)
PubChem (136828797)
PubChem (136828798)
PubChem (137226754)
PubChem (137257907)
PubChem (171699498)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains79
Total formula weight1816757.8
Non-Polymers*Number of molecules93
Total formula weight69984.3
All*Total formula weight1886742.1
*Water molecules are not included.

253389

PDB entries from 2026-05-13

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