8PSZ
Tilapia Lake Virus polymerase in vRNA elongation state with additional mode B promoter (transcriptase conformation)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Polymerase acidic protein (PA-like) | polymer | 419 | 47780.5 | 1 | UniProt (A0A142I7Z3) In PDB | Tilapia lake virus | |
2 | B | Putative PB1 | polymer | 519 | 57179.4 | 1 | UniProt (A0A1Y9SHW4) In PDB | Tilapia lake virus | |
3 | C | RNA-dependent RNA polymerase | polymer | 478 | 53782.1 | 1 | UniProt (A0A7G3S745) In PDB | Tilapia lake virus | |
4 | V, S, D | 5' vRNA end - vRNA loop (40-mer) | polymer | 40 | 12736.5 | 3 | Tilapia lake virus | ||
5 | P | Transcription-like product | polymer | 21 | 6675.0 | 1 | Tilapia lake virus | ||
6 | A, C | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) | |||
7 | B | [(2~{R},3~{S},4~{R},5~{R})-5-(4-azanyl-2-oxidanylidene-pyrimidin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-~{N}-[oxidanyl(phosphonooxy)phosphoryl]phosphonamidic acid | non-polymer | 482.2 | 1 | Chemie (A0I) | |||
8 | B | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
9 | water | water | 18.0 | 109 | Chemie (HOH) |
Sequence modifications
C: 1 - 457 (UniProt: A0A7G3S745)
PDB | External Database | Details |
---|---|---|
Lys 391 | Arg 391 | conflict |
Gly 458 | - | expression tag |
Ser 459 | - | expression tag |
Gly 460 | - | expression tag |
Ser 461 | - | expression tag |
Glu 462 | - | expression tag |
Asn 463 | - | expression tag |
Leu 464 | - | expression tag |
Tyr 465 | - | expression tag |
Phe 466 | - | expression tag |
Gln 467 | - | expression tag |
Gly 468 | - | expression tag |
His 469 | - | expression tag |
His 470 | - | expression tag |
His 471 | - | expression tag |
His 472 | - | expression tag |
His 473 | - | expression tag |
His 474 | - | expression tag |
His 475 | - | expression tag |
His 476 | - | expression tag |
His 477 | - | expression tag |
His 478 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 7 |
Total formula weight | 203626.6 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 727.0 | |
All* | Total formula weight | 204353.6 |