8PPZ
Co-crystal structure of FKBP12, compound 7 and the FRB fragment of mTOR
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Peptidyl-prolyl cis-trans isomerase FKBP1A | polymer | 107 | 11832.5 | 1 | UniProt (P62942) Pfam (PF00254) In PDB | Homo sapiens (human) | PPIase FKBP1A,12 kDa FK506-binding protein,12 kDa FKBP,FKBP-12,Calstabin-1,FK506-binding protein 1A,FKBP-1A,Immunophilin FKBP12,Rotamase |
2 | B | Serine/threonine-protein kinase mTOR | polymer | 98 | 11747.4 | 1 | UniProt (P42345) Pfam (PF08771) In PDB | Homo sapiens (human) | FK506-binding protein 12-rapamycin complex-associated protein 1,FKBP12-rapamycin complex-associated protein,Mammalian target of rapamycin,mTOR,Mechanistic target of rapamycin,Rapamycin and FKBP12 target 1,Rapamycin target protein 1 |
3 | A | (1~{S},5~{S},6~{R})-10-[3,5-bis(chloranyl)phenyl]sulfonyl-5-[(~{E})-2-(2-chlorophenyl)ethenyl]-3-(pyridin-2-ylmethyl)-3,10-diazabicyclo[4.3.1]decan-2-one | non-polymer | 590.9 | 1 | Chemie (0AN) | |||
4 | A, B | CALCIUM ION | non-polymer | 40.1 | 4 | Chemie (CA) | |||
5 | B | ACETATE ION | non-polymer | 59.0 | 1 | Chemie (ACT) | |||
6 | water | water | 18.0 | 128 | Chemie (HOH) |
Sequence modifications
A: 1 - 107 (UniProt: P62942)
B: 2025 - 2114 (UniProt: P42345)
PDB | External Database | Details |
---|---|---|
Val 22 | Cys 23 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Gly 2017 | - | expression tag |
Ala 2018 | - | expression tag |
Met 2019 | - | expression tag |
Asp 2020 | - | expression tag |
Pro 2021 | - | expression tag |
Glu 2022 | - | expression tag |
Phe 2023 | - | expression tag |
Met 2024 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 23579.9 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 810.3 | |
All* | Total formula weight | 24390.2 |