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8PPX

Influenza A/California/07/2009(H1N1) endonuclease in complex with flavonoid-like compound

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Polymerase acidic proteinpolymer18621640.61UniProt (C3W5X6)Influenza A virus (A/California/07/2009(H1N1))RNA-directed RNA polymerase subunit P2
2B
(A)
MANGANESE (II) IONnon-polymer54.91Chemie (MN)
3C
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
4D
(A)
CHLORIDE IONnon-polymer35.51Chemie (CL)
5E
(A)
5-oxidanyl-2-[4,5,7-tris(oxidanyl)naphthalen-2-yl]-1H-pyrimidin-6-onenon-polymer286.21Chemie (85W)
6F
(A)
waterwater18.025Chemie (HOH)
Sequence modifications
A: 1 - 50 (UniProt: C3W5X6)
PDBExternal DatabaseDetails
Ser -8-expression tag
Gly -7-expression tag
Ser -6-expression tag
Gly -5-expression tag
Ser -4-expression tag
Gly -3-expression tag
Ser -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
A: 73 - 196 (UniProt: C3W5X6)
PDBExternal DatabaseDetails
Gly 51-linker
Gly 52-linker
Ser 53-linker
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight21640.6
Non-Polymers*Number of molecules4
Total formula weight400.9
All*Total formula weight22041.5
*Water molecules are not included.

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PDB entries from 2025-06-18

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