8PM0
Influenza A/H7N9 polymerase in replicase-like conformation in pre-initiation state with Pol II pS5 CTD peptide mimic bound in site 1A/2A
This is a non-PDB format compatible entry.
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Polymerase acidic protein | polymer | 729 | 84354.2 | 1 | UniProt (M9TI86) Pfam (PF00603) In PDB | Influenza A virus (A/Zhejiang/DTID-ZJU01/2013(H7N9)) | |
2 | B | RNA-directed RNA polymerase catalytic subunit | polymer | 757 | 86496.2 | 1 | UniProt (M9TLW3) Pfam (PF00602) In PDB | Influenza A virus (A/Zhejiang/DTID-ZJU01/2013(H7N9)) | Polymerase basic protein 1,PB1,RNA-directed RNA polymerase subunit P1 |
3 | C | Polymerase basic protein 2 | polymer | 788 | 89037.6 | 1 | UniProt (X5F427) Pfam (PF20947) Pfam (PF20948) Pfam (PF20949) Pfam (PF20950) Pfam (PF00604) Pfam (PF20951) Pfam (PF20952) In PDB | Influenza A virus (A/Zhejiang/DTID-ZJU01/2013(H7N9)) | |
4 | V | 51-mer vRNA loop (v51_mut_S) | polymer | 51 | 16093.4 | 1 | Influenza A virus (A/Zhejiang/DTID-ZJU01/2013(H7N9)) | ||
5 | P, G | RNA Pol II CTD 6 repeats (site 1A/2A) | polymer | 42 | 4816.3 | 2 | Homo sapiens | ||
6 | B | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) |
Sequence modifications
A: 1 - 716 (UniProt: M9TI86)
C: 1 - 759 (UniProt: X5F427)
PDB | External Database | Details |
---|---|---|
Met -12 | - | initiating methionine |
His -11 | - | expression tag |
His -10 | - | expression tag |
His -9 | - | expression tag |
His -8 | - | expression tag |
His -7 | - | expression tag |
His -6 | - | expression tag |
His -5 | - | expression tag |
His -4 | - | expression tag |
Gly -3 | - | expression tag |
Ser -2 | - | expression tag |
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
Lys 349 | Glu 349 | engineered mutation |
Ile 490 | Arg 490 | engineered mutation |
PDB | External Database | Details |
---|---|---|
Arg 74 | Gly 74 | engineered mutation |
Gly 760 | - | expression tag |
Trp 761 | - | expression tag |
Ser 762 | - | expression tag |
His 763 | - | expression tag |
Pro 764 | - | expression tag |
Gln 765 | - | expression tag |
Phe 766 | - | expression tag |
Glu 767 | - | expression tag |
Lys 768 | - | expression tag |
Gly 769 | - | expression tag |
Gly 770 | - | expression tag |
Gly 771 | - | expression tag |
Ser 772 | - | expression tag |
Gly 773 | - | expression tag |
Gly 774 | - | expression tag |
Gly 775 | - | expression tag |
Ser 776 | - | expression tag |
Gly 777 | - | expression tag |
Gly 778 | - | expression tag |
Ser 779 | - | expression tag |
Ala 780 | - | expression tag |
Trp 781 | - | expression tag |
Ser 782 | - | expression tag |
His 783 | - | expression tag |
Pro 784 | - | expression tag |
Gln 785 | - | expression tag |
Phe 786 | - | expression tag |
Glu 787 | - | expression tag |
Lys 788 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 285614.0 | |
Non-Polymers* | Number of molecules | 1 |
Total formula weight | 24.3 | |
All* | Total formula weight | 285638.3 |