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8PIL

E. coli transcription complex paused at ops site and bound to RfaH and NusA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1PTranscription antitermination protein RfaHpolymer16418559.41UniProt (P0AFW0)
Pfam (PF02357)
In PDB
Escherichia coli
2IDNA-directed RNA polymerase subunit betapolymer1342150820.91UniProt (P0A8V2)
Pfam (PF04561)
Pfam (PF04565)
Pfam (PF10385)
Pfam (PF00562)
Pfam (PF04560)
Pfam (PF04563)
In PDB
Escherichia coliRNAP subunit beta,RNA polymerase subunit beta,Transcriptase subunit beta
3JDNA-directed RNA polymerase subunit beta'polymer1416156505.01UniProt (P0A8T7)
Pfam (PF04997)
Pfam (PF00623)
Pfam (PF04983)
Pfam (PF05000)
Pfam (PF04998)
In PDB
Escherichia coliRNAP subunit beta',RNA polymerase subunit beta',Transcriptase subunit beta'
4KDNA-directed RNA polymerase subunit omegapolymer9110249.51UniProt (P0A800)
Pfam (PF01192)
In PDB
Escherichia coliRNAP omega subunit,RNA polymerase omega subunit,Transcriptase subunit omega
5G, HDNA-directed RNA polymerase subunit alphapolymer32936558.72UniProt (P0A7Z4)
Pfam (PF01193)
Pfam (PF01000)
Pfam (PF03118)
In PDB
Escherichia coliRNAP subunit alpha,RNA polymerase subunit alpha,Transcriptase subunit alpha
6Anon-template DNApolymer4012207.81Escherichia coli
7Btemplate DNApolymer4012422.01Escherichia coli
8RRNApolymer175414.21Escherichia coli
9FTranscription termination/antitermination protein NusApolymer49755086.81UniProt (P0AFF6)
Pfam (PF08529)
Pfam (PF00575)
Pfam (PF13184)
Pfam (PF14520)
In PDB
Escherichia coliN utilization substance protein A,Transcription termination/antitermination L factor
10JZINC IONnon-polymer65.42Chemie (ZN)
11JMAGNESIUM IONnon-polymer24.31Chemie (MG)
Sequence modifications
P: 1 - 162 (UniProt: P0AFW0)
PDBExternal DatabaseDetails
Gly -1-expression tag
His 0-expression tag
J: 2 - 1407 (UniProt: P0A8T7)
PDBExternal DatabaseDetails
Val 1-expression tag
Leu 1408-expression tag
Glu 1409-expression tag
Val 1410-expression tag
His 1411-expression tag
His 1412-expression tag
His 1413-expression tag
His 1414-expression tag
His 1415-expression tag
His 1416-expression tag
F: 1 - 495 (UniProt: P0AFF6)
PDBExternal DatabaseDetails
Gly -1-expression tag
Pro 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight494383.0
Non-Polymers*Number of molecules3
Total formula weight155.1
All*Total formula weight494538.1
*Water molecules are not included.

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PDB entries from 2024-07-24

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