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8PEP

H3K36me2 nucleosome-LEDGF/p75 PWWP domain complex - pose 2

Replaces:  7PH6
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1AHistone H3polymer13515316.91UniProt (A0A310TTQ1)
Pfam (PF00125)
UniProt (by SIFTS) (P84233)
In PDB
Xenopus laevis (African clawed frog)
2B, FHistone H4polymer10211263.22UniProt (P62799)
Pfam (PF15511)
In PDB
Xenopus laevis (African clawed frog)
3C, GHistone H2Apolymer12913978.22UniProt (Q6AZJ8)
Pfam (PF00125)
Pfam (PF16211)
UniProt (by SIFTS) (P06897)
In PDB
Xenopus laevis (African clawed frog)
4D, HHistone H2B 1.1polymer12213524.82UniProt (P02281)
Pfam (PF00125)
In PDB
Xenopus laevis (African clawed frog)H2B1.1
5EHistone H3polymer13415142.71UniProt (A0A310TTQ1)
Pfam (PF00125)
UniProt (by SIFTS) (P84233)
In PDB
Xenopus laevis (African clawed frog)
6IWidom 601 DNA (147-MER)polymer14745138.81synthetic construct
7K, LPC4 and SFRS1-interacting proteinpolymer53060224.52UniProt (O75475)
Pfam (PF00855)
Pfam (PF11467)
In PDB
Homo sapiens (human)CLL-associated antigen KW-7,Dense fine speckles 70 kDa protein,DFS 70,Lens epithelium-derived growth factor,Transcriptional coactivator p75/p52
8JWidom 601 DNA (147-MER)polymer14745610.01synthetic construct
Sequence modifications
A: 1 - 135 (UniProt: A0A310TTQ1)
PDBExternal DatabaseDetails
Ala 110Cys 111conflict
D, H: 1 - 122 (UniProt: P02281)
PDBExternal DatabaseDetails
Thr 29Ser 33conflict
E: 38 - 135 (UniProt: A0A310TTQ1)
PDBExternal DatabaseDetails
Ala 2-expression tag
Arg 3-expression tag
Thr 4-expression tag
Lys 5-expression tag
Gln 6-expression tag
Thr 7-expression tag
Ala 8-expression tag
Arg 9-expression tag
Lys 10-expression tag
Ser 11-expression tag
Thr 12-expression tag
Gly 13-expression tag
Gly 14-expression tag
Lys 15-expression tag
Ala 16-expression tag
Pro 17-expression tag
Arg 18-expression tag
Lys 19-expression tag
Gln 20-expression tag
Leu 21-expression tag
Ala 22-expression tag
Thr 23-expression tag
Lys 24-expression tag
Ala 25-expression tag
Ala 26-expression tag
Arg 27-expression tag
Lys 28-expression tag
Ser 29-expression tag
Ala 30-expression tag
Pro 31-expression tag
Ala 32-expression tag
Thr 33-expression tag
Gly 34-expression tag
Gly 35-expression tag
Val 36-expression tag
Lys 37-expression tag
Ala 110Cys 111conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight319189.8
All*Total formula weight319189.8
*Water molecules are not included.

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PDB entries from 2024-09-04

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