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8P8U

Yeast 60S ribosomal subunit

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1260S ribosomal protein L39polymer516358.61UniProt (P04650)
Pfam (PF00832)
In PDB
Saccharomyces cerevisiae (baker's yeast)L46,Large ribosomal subunit protein eL39,YL40
2LK60S ribosomal protein L7-Apolymer24427686.31UniProt (P05737)
Pfam (PF08079)
Pfam (PF00327)
In PDB
Saccharomyces cerevisiae (baker's yeast)L6,Large ribosomal subunit protein uL30-A,RP11,YL8
3QX60S ribosomal protein L25polymer14215787.61UniProt (P04456)
Pfam (PF03939)
Pfam (PF00276)
In PDB
Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein uL23,RP16L,YL25,YP42'
4RM60S ribosomal protein L38polymer788845.61UniProt (P49167)
Pfam (PF01781)
In PDB
Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL38
5A25S rRNApolymer33961097493.91GenBank (834774822)Saccharomyces cerevisiae (baker's yeast)
6LL60S ribosomal protein L8-Apolymer25628175.81UniProt (P17076)
Pfam (PF01248)
In PDB
Saccharomyces cerevisiae (baker's yeast)L4,L4-2,L7a-1,Large ribosomal subunit protein eL8-A,Maintenance of killer protein 7,RP6,YL5
7QY60S ribosomal protein L26-Apolymer12714265.81UniProt (P05743)
Pfam (PF16906)
Pfam (PF00467)
In PDB
Saccharomyces cerevisiae (baker's yeast)L33,Large ribosomal subunit protein uL24-A,YL33
8ROUbiquitin-60S ribosomal protein L40polymer12814583.11UniProt (P0CH08)
Pfam (PF00240)
Pfam (PF01020)
In PDB
Saccharomyces cerevisiae (baker's yeast)
9JT60S ribosomal protein L13-Apolymer19922604.21UniProt (Q12690)
Pfam (PF01294)
In PDB
Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL13-A
10LM60S ribosomal protein L9-Apolymer19121605.11UniProt (P05738)
Pfam (PF00347)
In PDB
Saccharomyces cerevisiae (baker's yeast)L8,Large ribosomal subunit protein uL6-A,RP24,YL11
11QZ60S ribosomal protein L27-Apolymer13615568.41UniProt (P0C2H6)
Pfam (PF01777)
In PDB
Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL27-A
12RQ60S ribosomal protein L42-Apolymer10612246.71UniProt (P0CX27)
Pfam (PF00935)
In PDB
Saccharomyces cerevisiae (baker's yeast)L41,Large ribosomal subunit protein eL42-A,YL27,YP44
13JU60S ribosomal protein L14-Apolymer13815195.11UniProt (P36105)
Pfam (PF00467)
Pfam (PF01929)
In PDB
Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL14-A
14LN60S ribosomal protein L10polymer22125410.51UniProt (P41805)
Pfam (PF00252)
In PDB
Saccharomyces cerevisiae (baker's yeast)L9,Large ribosomal subunit protein uL16,Ubiquinol-cytochrome C reductase complex subunit VI-requiring protein
15RA60S ribosomal protein L28polymer14916761.71UniProt (P02406)
Pfam (PF00828)
In PDB
Saccharomyces cerevisiae (baker's yeast)L27a,L29,Large ribosomal subunit protein uL15,RP44,RP62,YL24
16RT60S ribosomal protein L43-Apolymer9210113.01UniProt (P0CX25)
Pfam (PF01780)
In PDB
Saccharomyces cerevisiae (baker's yeast)L37a,Large ribosomal subunit protein eL43-A,YL35
17JV60S ribosomal protein L15-Apolymer20424482.41UniProt (P05748)
Pfam (PF00827)
In PDB
Saccharomyces cerevisiae (baker's yeast)L13,Large ribosomal subunit protein eL15-A,RP15R,YL10,YP18
18LO60S ribosomal protein L11-Apolymer17419755.71UniProt (P0C0W9)
Pfam (PF00281)
Pfam (PF00673)
In PDB
Saccharomyces cerevisiae (baker's yeast)L16,Large ribosomal subunit protein uL5-A,RP39,YL22
19RB60S ribosomal protein L29polymer596691.91UniProt (P05747)
Pfam (PF01779)
In PDB
Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL29,YL43
20QO60S ribosomal protein L17-Apolymer18420589.51UniProt (P05740)
Pfam (PF00237)
In PDB
Saccharomyces cerevisiae (baker's yeast)L20A,Large ribosomal subunit protein uL22-A,YL17
21JW60S ribosomal protein L16-Apolymer19922247.21UniProt (P26784)
Pfam (PF00572)
In PDB
Saccharomyces cerevisiae (baker's yeast)L13a,L21,Large ribosomal subunit protein uL13-A,RP22,YL15
22QP60S ribosomal protein L18-Apolymer18620609.31UniProt (P0CX49)
Pfam (PF17135)
In PDB
Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL18-A,RP28
23RC60S ribosomal protein L30polymer10511430.41UniProt (P14120)
Pfam (PF01248)
In PDB
Saccharomyces cerevisiae (baker's yeast)L32,Large ribosomal subunit protein eL30,RP73,YL38
24QQ60S ribosomal protein L19-Apolymer18921762.31UniProt (P0CX82)
Pfam (PF01280)
In PDB
Saccharomyces cerevisiae (baker's yeast)L23,Large ribosomal subunit protein eL19-A,RP15L,RP33,YL14
25LD5.8S rRNApolymer15850682.91GenBank (1331532632)Saccharomyces cerevisiae (baker's yeast)
26QS60S ribosomal protein L20-Apolymer17220478.91UniProt (P0CX23)
Pfam (PF01775)
In PDB
Saccharomyces cerevisiae (baker's yeast)L18a,Large ribosomal subunit protein eL20-A
27RD60S ribosomal protein L31-Apolymer11312980.21UniProt (P0C2H8)
Pfam (PF01198)
In PDB
Saccharomyces cerevisiae (baker's yeast)L34,Large ribosomal subunit protein eL31-A,YL28
28QT60S ribosomal protein L21-Apolymer16018279.31UniProt (Q02753)
Pfam (PF01157)
In PDB
Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL21-A
29LE5S rRNApolymer12138951.11GenBank (1329886537)Saccharomyces cerevisiae (baker's yeast)
30QU60S ribosomal protein L22-Apolymer12113711.41UniProt (P05749)
Pfam (PF01776)
In PDB
Saccharomyces cerevisiae (baker's yeast)L1c,Large ribosomal subunit protein eL22-A,RP4,YL31
31RE60S ribosomal protein L32polymer13014809.41UniProt (P38061)
Pfam (PF01655)
In PDB
Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL32
32QV60S ribosomal protein L23-Apolymer13714494.01UniProt (P0CX41)
Pfam (PF00238)
In PDB
Saccharomyces cerevisiae (baker's yeast)L17a,Large ribosomal subunit protein uL14-A,YL32
33LF60S ribosomal protein L2-Apolymer25427463.61UniProt (P0CX45)
Pfam (PF00181)
Pfam (PF03947)
In PDB
Saccharomyces cerevisiae (baker's yeast)L5,Large ribosomal subunit protein uL2-A,RP8,YL6
34QW60S ribosomal protein L24-Apolymer15517661.71UniProt (P04449)
Pfam (PF01246)
In PDB
Saccharomyces cerevisiae (baker's yeast)L30,Large ribosomal subunit protein eL24-A,RP29,YL21
35RF60S ribosomal protein L33-Apolymer10712177.11UniProt (P05744)
Pfam (PF01247)
In PDB
Saccharomyces cerevisiae (baker's yeast)L37,Large ribosomal subunit protein eL33-A,RP47,YL37
36LG60S ribosomal protein L3polymer38743850.81UniProt (P14126)
Pfam (PF00297)
In PDB
Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein uL3,Maintenance of killer protein 8,RP1,Trichodermin resistance protein,YL1
37RG60S ribosomal protein L34-Apolymer12113673.21UniProt (P87262)
Pfam (PF01199)
In PDB
Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein eL34-A
38LH60S ribosomal protein L4-Apolymer36239159.11UniProt (P10664)
Pfam (PF00573)
Pfam (PF14374)
In PDB
Saccharomyces cerevisiae (baker's yeast)L2,Large ribosomal subunit protein uL4-A,RP2,YL2
39RH60S ribosomal protein L35-Apolymer12013942.61UniProt (P0CX84)
Pfam (PF00831)
In PDB
Saccharomyces cerevisiae (baker's yeast)Large ribosomal subunit protein uL29-A
40LI60S ribosomal protein L5polymer29733764.81UniProt (P26321)
Pfam (PF17144)
Pfam (PF14204)
In PDB
Saccharomyces cerevisiae (baker's yeast)L1,L1a,Large ribosomal subunit protein uL18,Ribosomal 5S RNA-binding protein,YL3
41RI60S ribosomal protein L36-Apolymer10011151.31UniProt (P05745)
Pfam (PF01158)
In PDB
Saccharomyces cerevisiae (baker's yeast)L39,Large ribosomal subunit protein eL36-A,YL39
42LJ60S ribosomal protein L6-Apolymer17620000.61UniProt (Q02326)
Pfam (PF01159)
In PDB
Saccharomyces cerevisiae (baker's yeast)L17,Large ribosomal subunit protein eL6-A,RP18,YL16
43RJ60S ribosomal protein L37-Apolymer889877.41UniProt (P49166)
Pfam (PF01907)
In PDB
Saccharomyces cerevisiae (baker's yeast)L43,Large ribosomal subunit protein eL37-A,YL35,YP55
44A, QO, LD, LEMAGNESIUM IONnon-polymer24.3129Chemie (MG)
45A, RQ, JV, QO, LGCHLORIDE IONnon-polymer35.524Chemie (CL)
46ASPERMINEnon-polymer202.31Chemie (SPM)
47ASPERMIDINEnon-polymer145.21Chemie (SPD)
48RO, RQ, RT, RG, RJZINC IONnon-polymer65.45Chemie (ZN)
49waterwater18.0547Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains43
Total formula weight1927378.9
Non-Polymers*Number of molecules160
Total formula weight4660.8
All*Total formula weight1932039.8
*Water molecules are not included.

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PDB entries from 2024-07-24

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