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8P8G

Nitrogenase MoFe protein from A. vinelandii beta double mutant D353G/D357G

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Nitrogenase protein alpha chainpolymer50056467.22UniProt (C1DGZ7)
Pfam (PF00148)
UniProt (by SIFTS) (P07328)
Azotobacter vinelandii DJ
2B, D
(B, D)
Nitrogenase molybdenum-iron protein beta chainpolymer52359419.82UniProt (C1DGZ8)
Pfam (PF11844)
Pfam (PF00148)
UniProt (by SIFTS) (P07329)
Azotobacter vinelandii DJDinitrogenase
3CA, DA, E, EA, FA...
(C, A, D, B)
1,2-ETHANEDIOLnon-polymer62.135Chemie (EDO)
4F, Y
(A, C)
CHLORIDE IONnon-polymer35.52Chemie (CL)
5AA, G
(C, A)
3-HYDROXY-3-CARBOXY-ADIPIC ACIDnon-polymer206.22Chemie (HCA)
6BA, H
(C, A)
iron-sulfur-molybdenum cluster with interstitial carbonnon-polymer787.52Chemie (ICS)
7R, UA
(B, D)
1,4-DIETHYLENE DIOXIDEnon-polymer88.12Chemie (DIO)
8U
(B)
GLYCEROLnon-polymer92.11Chemie (GOL)
9W, ZA
(B, D)
FE(8)-S(7) CLUSTER, OXIDIZEDnon-polymer671.22Chemie (1CL)
10AB, X
(D, B)
FE(8)-S(7) CLUSTERnon-polymer671.22Chemie (CLF)
11Z
(C)
SODIUM IONnon-polymer23.01Chemie (NA)
12BB, CB, DB, EB
(A, B, C, D)
waterwater18.02173Chemie (HOH)
Sequence modifications
A, C: 3 - 492 (UniProt: C1DGZ7)
PDBExternal DatabaseDetails
Met -7-initiating methionine
Thr -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
His -1-expression tag
His 0-expression tag
His 1-expression tag
His 2-expression tag
B, D: 1 - 523 (UniProt: C1DGZ8)
PDBExternal DatabaseDetails
Gly 353Asp 353engineered mutation
Gly 357Asp 357engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight231774.1
Non-Polymers*Number of molecules49
Total formula weight7206.6
All*Total formula weight238980.7
*Water molecules are not included.

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PDB entries from 2025-12-24

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