8P60

Spraguea lophii ribosome dimer

This is a non-PDB format compatible entry.

Replaces:  7QJH

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	L50, K50	RNA 28S	polymer	2618	849039.8	2		Spraguea lophii 42_110
2	L70, K70	RNA 5S	polymer	119	38356.8	2		Spraguea lophii 42_110
3	LA0, KA0	60S ribosomal protein L8	polymer	246	27005.5	2		Spraguea lophii 42_110
4	LAA, KAA	Ribosomal protein L18e/L15P	polymer	147	16609.5	2		Spraguea lophii 42_110	uL15
5	LB0, KB0	60S ribosomal protein L3	polymer	392	44320.6	2	UniProt (S7XFB1) Pfam (PF00297) In PDB	Spraguea lophii 42_110
6	LC0, KC0	60S ribosomal protein L4	polymer	328	37241.6	2	UniProt (S7WCM8) Pfam (PF00573) In PDB	Spraguea lophii 42_110
7	LCC, KCC	60S ribosomal protein L3	polymer	110	12484.4	2	UniProt (S7WAY0) Pfam (PF01248) In PDB	Spraguea lophii 42_110
8	LD0, KD0	60S ribosomal protein L5	polymer	291	33892.3	2	UniProt (S7XIG7) Pfam (PF17144) Pfam (PF14204) In PDB	Spraguea lophii 42_110
9	LDD, KDD	60S ribosomal protein L31	polymer	110	12854.2	2	UniProt (S7XW48) Pfam (PF01198) In PDB	Spraguea lophii 42_110
10	LE0, KE0	60S ribosomal protein L6	polymer	171	20220.1	2	UniProt (S7W5S3) In PDB	Spraguea lophii 42_110
11	LEE, KEE	60S ribosomal protein L32	polymer	139	16076.0	2	UniProt (S7XKE0) Pfam (PF01655) In PDB	Spraguea lophii 42_110
12	LF0, KF0	60S ribosomal protein L7	polymer	235	27935.6	2	UniProt (S7W946) Pfam (PF00327) In PDB	Spraguea lophii 42_110
13	LFF, KFF	60S ribosomal protein L35a	polymer	111	12758.0	2	UniProt (S7W662) Pfam (PF01247) In PDB	Spraguea lophii 42_110
14	LG0, KG0	60S ribosomal protein L8	polymer	206	23605.0	2	UniProt (S7XU63) Pfam (PF01248) In PDB	Spraguea lophii 42_110
15	LGG, KGG	Ribosomal protein L34	polymer	106	12020.3	2	UniProt (S7W7C6) Pfam (PF01199) In PDB	Spraguea lophii 42_110
16	LH0, KH0	60S ribosomal protein L9	polymer	187	21538.2	2	UniProt (S7XRZ9) Pfam (PF00347) In PDB	Spraguea lophii 42_110
17	LHH, KHH	Ribosomal L29 protein	polymer	119	14183.9	2		Spraguea lophii 42_110
18	LI0, KI0	S60 ribosomal protein L10	polymer	218	25142.3	2	UniProt (S7WBF8) Pfam (PF00252) In PDB	Spraguea lophii 42_110
19	LII, KII	60S ribosomal protein L36	polymer	98	11350.7	2	UniProt (S7WED1) Pfam (PF01158) In PDB	Spraguea lophii 42_110
20	LJ0, KJ0	60S ribosomal protein L11	polymer	171	19485.0	2	UniProt (S7WB69) Pfam (PF00281) Pfam (PF00673) In PDB	Spraguea lophii 42_110
21	LJJ, KJJ	60S ribosomal protein L37	polymer	92	10517.7	2		Spraguea lophii 42_110	eL37
22	LL0, KL0	60S ribosomal protein L13	polymer	165	19513.1	2	UniProt (S7XVM9) Pfam (PF01294) In PDB	Spraguea lophii 42_110
23	LLL, KLL	60S ribosomal protein L39	polymer	52	6227.6	2	UniProt (S7XTP1) Pfam (PF00832) In PDB	Spraguea lophii 42_110
24	LM0, KM0	Transposase	polymer	115	13258.3	2	UniProt (S7XVN9) In PDB	Spraguea lophii 42_110
25	LMM, KMM	Ubiquitin	polymer	127	14563.9	2	UniProt (S7XSQ3) Pfam (PF00240) Pfam (PF01020) In PDB	Spraguea lophii 42_110
26	LN0, KN0	Ribosomal protein L15	polymer	204	24200.4	2	UniProt (S7W7A2) Pfam (PF00827) In PDB	Spraguea lophii 42_110
27	LO0, KO0	Ribosomal protein L13A	polymer	198	22885.1	2	UniProt (S7XUD8) Pfam (PF00572) In PDB	Spraguea lophii 42_110
28	LOO, KOO	60S ribosomal protein L44	polymer	104	11990.5	2	UniProt (S7XL20) Pfam (PF00935) In PDB	Spraguea lophii 42_110
29	LP0, KP0	60S ribosomal protein L17	polymer	167	19114.5	2	UniProt (S7WDR4) Pfam (PF00237) In PDB	Spraguea lophii 42_110
30	LPP, KPP	60S ribosomal protein L37a	polymer	89	10151.1	2		Spraguea lophii 42_110
31	LQ0, KQ0	60S ribosomal protein L18	polymer	183	21378.1	2	UniProt (S7WAI2) Pfam (PF17135) In PDB	Spraguea lophii 42_110
32	LR0, KR0	60S ribosomal protein L19	polymer	168	19550.0	2	UniProt (S7WBY9) Pfam (PF01280) In PDB	Spraguea lophii 42_110
33	LS0, KS0	60S ribosomal protein L20	polymer	171	20043.4	2	UniProt (S7WAG4) Pfam (PF01775) In PDB	Spraguea lophii 42_110
34	LT0, KT0	60s ribosomal protein L21	polymer	158	18344.4	2	UniProt (S7W8F6) Pfam (PF01157) In PDB	Spraguea lophii 42_110
35	LU0, KU0	60S ribosomal protein L22	polymer	113	12854.8	2	UniProt (S7W958) Pfam (PF01776) In PDB	Spraguea lophii 42_110
36	LV0, KV0	Ribosomal protein L23	polymer	142	15240.0	2	UniProt (S7XLC4) Pfam (PF00238) In PDB	Spraguea lophii 42_110
37	LW0, KW0	Ribosomal protein L24E	polymer	131	15342.2	2	UniProt (S7XSY2) Pfam (PF01246) In PDB	Spraguea lophii 42_110
38	LX0, KX0	60S ribosomal protein L23a	polymer	113	12557.9	2	UniProt (S7XFW8) Pfam (PF00276) In PDB	Spraguea lophii 42_110
39	LY0, KY0	60S ribosomal protein L26	polymer	131	15026.9	2	UniProt (S7W884) Pfam (PF16906) Pfam (PF00467) In PDB	Spraguea lophii 42_110
40	LZ0, KZ0	60S ribosomal protein L27	polymer	153	18247.8	2	UniProt (S7XU08) Pfam (PF01777) In PDB	Spraguea lophii 42_110
41	MD1, MD2	DNL-type domain-containing protein	polymer	151	17595.1	2	UniProt (S7W5K5) Pfam (PF05907) In PDB	Spraguea lophii 42_110
42	S60, R60	RNA 16S	polymer	1368	444812.5	2		Spraguea lophii 42_110
43	SA0, RA0	40S ribosomal protein S0	polymer	233	26201.2	2	UniProt (S7W8R1) Pfam (PF00318) In PDB	Spraguea lophii 42_110
44	SAA, RAA	40S ribosomal protein S26	polymer	102	11974.1	2	UniProt (S7W9M7) Pfam (PF01283) In PDB	Spraguea lophii 42_110
45	SB0, RB0	40S ribosomal protein S1	polymer	230	25934.7	2		Spraguea lophii 42_110	eS1
46	SBB, RBB	40S ribosomal protein S27	polymer	82	9189.9	2		Spraguea lophii 42_110	eS27
47	SC0, RC0	40S ribosomal protein S2	polymer	248	27241.5	2	UniProt (S7W7R5) Pfam (PF00333) Pfam (PF03719) In PDB	Spraguea lophii 42_110
48	SCC, RCC	40S ribosomal protein S28	polymer	65	7288.5	2		Spraguea lophii 42_110	eS28
49	SD0, RD0	40S ribosomal protein S3	polymer	242	27516.5	2	UniProt (S7WAW0) Pfam (PF00189) In PDB	Spraguea lophii 42_110
50	SDD, RDD	40S ribosomal protein S29	polymer	65	7891.2	2	UniProt (S7XJB1) Pfam (PF00253) In PDB	Spraguea lophii 42_110
51	SE0, RE0	40S ribosomal protein S4	polymer	280	31442.2	2	UniProt (S7XG51) Pfam (PF08071) Pfam (PF00900) Pfam (PF16121) In PDB	Spraguea lophii 42_110
52	SEE, REE	40S ribosomal protein S30	polymer	60	6816.0	2		Spraguea lophii 42_110	eS30
53	SF0, RF0	40S ribosomal protein S5	polymer	195	21982.8	2	UniProt (S7W4M9) Pfam (PF00177) In PDB	Spraguea lophii 42_110
54	SFF, RFF	Ubiquitin/40s ribosomal protein S27a fusion	polymer	150	16937.8	2	UniProt (S7W9X5) Pfam (PF00240) Pfam (PF01599) In PDB	Spraguea lophii 42_110
55	SG0, RG0	40S ribosomal protein S6	polymer	230	26194.9	2		Spraguea lophii 42_110
56	SGG, RGG	Guanine nucleotide binding protein beta subunit	polymer	326	36182.8	2	UniProt (S7XVG3) Pfam (PF00400) In PDB	Spraguea lophii 42_110
57	SH0, RH0	40S ribosomal protein S7	polymer	164	19132.0	2	UniProt (S7XV29) Pfam (PF01251) In PDB	Spraguea lophii 42_110
58	SI0, RI0	40S ribosomal protein S8	polymer	173	19912.1	2	UniProt (S7XGW2) Pfam (PF01201) In PDB	Spraguea lophii 42_110
59	SJ0, RJ0	40S ribosomal protein S9	polymer	184	21366.0	2	UniProt (S7W8E3) Pfam (PF01479) In PDB	Spraguea lophii 42_110
60	SK0, RK0	40S ribosomal protein S10	polymer	107	12702.5	2	UniProt (S7XU48) Pfam (PF03501) In PDB	Spraguea lophii 42_110
61	SL0, RL0	40S ribosomal protein S11	polymer	155	18109.4	2	UniProt (S7W8R0) Pfam (PF16205) Pfam (PF00366) In PDB	Spraguea lophii 42_110
62	SM0, RM0	40S ribosomal protein S12	polymer	130	14343.7	2	UniProt (S7W7D2) Pfam (PF01248) In PDB	Spraguea lophii 42_110
63	SN0, RN0	40S ribosomal protein S13	polymer	143	16192.0	2	UniProt (S7XVZ9) Pfam (PF08069) In PDB	Spraguea lophii 42_110
64	SO0, RO0	40S ribosomal protein S14	polymer	135	14708.0	2	UniProt (S7W6I0) Pfam (PF00411) In PDB	Spraguea lophii 42_110
65	SQ0, RQ0	40S ribosomal protein S16	polymer	143	16415.1	2	UniProt (S7WDU9) Pfam (PF00380) In PDB	Spraguea lophii 42_110
66	SR0, RR0	40S ribosomal protein S17	polymer	120	14055.3	2		Spraguea lophii 42_110	eS17
67	SS0, RS0	40S ribosomal protein S18	polymer	160	18171.1	2	UniProt (S7XJA1) Pfam (PF00416) In PDB	Spraguea lophii 42_110
68	ST0, RT0	40S Ribosomal protein S19	polymer	143	16603.3	2	UniProt (S7W7P5) Pfam (PF01090) In PDB	Spraguea lophii 42_110
69	SU0, RU0	40S ribosomal protein S20	polymer	119	13777.1	2	UniProt (S7W986) Pfam (PF00338) In PDB	Spraguea lophii 42_110
70	SV0, RV0	Ribosomal protein S21E	polymer	67	7768.9	2	UniProt (S7WAC1) Pfam (PF01249) In PDB	Spraguea lophii 42_110
71	SW0, RW0	40S ribosomal protein S15A	polymer	128	14620.1	2	UniProt (S7XK92) Pfam (PF00410) In PDB	Spraguea lophii 42_110
72	SX0, RX0	Ribosomal protein S12/S23	polymer	141	15822.7	2		Spraguea lophii 42_110	uS12
73	SY0, RY0	40s ribosomal protein s24	polymer	146	17189.9	2	UniProt (S7W8J5) Pfam (PF01282) In PDB	Spraguea lophii 42_110
74	SZ0, RZ0	40S ribosomal protein S25	polymer	128	14777.1	2	UniProt (S7WAV8) Pfam (PF03297) In PDB	Spraguea lophii 42_110
75	SP0, RP0	Ribosomal protein S19	polymer	163	18514.6	2	UniProt (S7XKY9) Pfam (PF00203) In PDB	Spraguea lophii 42_110
76	SBB, SDD, SFF, KGG, KJJ...	ZINC ION	non-polymer		65.4	18	Chemie (ZN)

Contents of the asymmetric unit

Polymers	Number of chains	150
	Total formula weight	5293020.0
Non-Polymers*	Number of molecules	18
	Total formula weight	1177.4
All*	Total formula weight	5294197.4

*Water molecules are not included.