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8P4T

The spike complex of the Lujo Virus

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, CGlycoproteinpolymer16319017.63UniProt (C5ILC1)
Pfam (PF00798)
In PDB
Mammarenavirus lujoense
2a, b, cGlycoproteinpolymer24728267.63UniProt (C5ILC1)
Pfam (PF00798)
In PDB
Mammarenavirus lujoense
3SA, SB, SCGlycoproteinpolymer586502.03UniProt (C5ILC1)
Pfam (PF00798)
In PDB
Mammarenavirus lujoense
4D, G, Ialpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranosebranched894.83In PDB
GlyTouCan (G42466VF)
5E, H, Jalpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)-alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched1235.13In PDB
GlyTouCan (G23799GS)
6F, K, L2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranosebranched424.43In PDB
GlyTouCan (G42666HT)
7B, C, b, c, A...2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.221Chemie (NAG)
8ASODIUM IONnon-polymer23.01Chemie (NA)
Sequence modifications
a, b, c: 222 - 454 (UniProt: C5ILC1)
PDBExternal DatabaseDetails
Gly 455-expression tag
Gly 456-expression tag
Asp 457-expression tag
Tyr 458-expression tag
Lys 459-expression tag
Asp 460-expression tag
Asp 461-expression tag
Asp 462-expression tag
Asp 463-expression tag
Lys 464-expression tag
Gly 465-expression tag
Ser 466-expression tag
Gly 467-expression tag
Thr 468-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains9
Total formula weight161361.6
BranchedNumber of molecules9
Total formula weight7663.0
Non-Polymers*Number of molecules22
Total formula weight4668.4
All*Total formula weight173692.9
*Water molecules are not included.

223532

PDB entries from 2024-08-07

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