Loading
PDBj
English日本語简体中文繁體中文한국어
✖
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

8P2F

Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational state

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1150S ribosomal protein L28polymer626995.31UniProt (Q2FZ60)
Pfam (PF00830)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
2250S ribosomal protein L29polymer698105.31UniProt (Q2FW14)
Pfam (PF00831)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
3350S ribosomal protein L30polymer596565.71UniProt (P0A0G2)
Pfam (PF00327)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
4450S ribosomal protein L31 type Bpolymer849737.91UniProt (Q2FWD8)
Pfam (PF01197)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
5550S ribosomal protein L32polymer576500.61UniProt (Q2FZF1)
Pfam (PF01783)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
6650S ribosomal protein L33 1polymer495944.91UniProt (Q2FYU6)
Pfam (PF00471)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
7750S ribosomal protein L34polymer455454.61UniProt (Q2FUQ0)
Pfam (PF00468)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
8850S ribosomal protein L35polymer667722.41UniProt (Q2FXQ0)
Pfam (PF01632)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
9950S ribosomal protein L36polymer374318.41UniProt (Q2FW29)
Pfam (PF00444)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
10A23S ribosomal RNApolymer2923946782.71GenBank (CP000253)Staphylococcus aureus subsp. aureus NCTC 8325
11B5S ribosomal RNApolymer11536974.91GenBank (CP000253.1)Staphylococcus aureus subsp. aureus NCTC 8325
12D, FtRNApolymer7724802.82GenBank (1848851804)Escherichia coli
13EElongation factor Gpolymer69376699.31UniProt (Q2G0N1)
Pfam (PF00009)
Pfam (PF03144)
Pfam (PF14492)
Pfam (PF03764)
Pfam (PF00679)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325EF-G
14G50S ribosomal protein L2polymer27730217.21UniProt (P60430)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
15H50S ribosomal protein L3polymer22023760.31UniProt (Q2FW06)
Pfam (PF00297)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
16I50S ribosomal protein L4polymer20722495.71UniProt (Q2FW07)
Pfam (PF00573)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
17J50S ribosomal protein L5polymer17920296.61UniProt (Q2FW18)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
18K50S ribosomal protein L6polymer17819818.61UniProt (Q2FW21)
Pfam (PF00347)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
19M50S ribosomal protein L13polymer14516359.41UniProt (Q2FW38)
Pfam (PF00572)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
20N50S ribosomal protein L14polymer12213157.31UniProt (Q2FW16)
Pfam (PF00238)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
21O50S ribosomal protein L15polymer14615628.91UniProt (P0A0F8)
Pfam (PF00828)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
22P50S ribosomal protein L16polymer14416274.01UniProt (Q2FW13)
Pfam (PF00252)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
23Q50S ribosomal protein L17polymer12213771.81UniProt (Q2FW33)
Pfam (PF01196)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
24R50S ribosomal protein L18polymer11913124.11UniProt (Q2FW22)
Pfam (PF00861)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
25S50S ribosomal protein L19polymer11613392.81UniProt (Q2FZ42)
Pfam (PF01245)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
26T50S ribosomal protein L20polymer11813720.31UniProt (Q2FXQ1)
Pfam (PF00453)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
27U50S ribosomal protein L21polymer10211354.11UniProt (Q2FXS8)
Pfam (PF00829)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
28V50S ribosomal protein L22polymer11712857.91UniProt (Q2FW11)
Pfam (PF00237)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
29W50S ribosomal protein L23polymer9110625.41UniProt (Q2FW08)
Pfam (PF00276)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
30X50S ribosomal protein L24polymer10511561.51UniProt (Q2FW17)
Pfam (PF00467)
Pfam (PF17136)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
31Y50S ribosomal protein L25polymer21723810.61UniProt (Q2G0S0)
Pfam (PF01386)
Pfam (PF14693)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325General stress protein CTC
32Z50S ribosomal protein L27polymer9410334.81UniProt (Q2FXT0)
Pfam (PF01016)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
33a16S ribosomal RNApolymer1555503117.21GenBank (CP000253)Staphylococcus aureus subsp. aureus NCTC 8325
34bmRNApolymer247889.91Escherichia coli
35c30S ribosomal protein S2polymer25529136.41UniProt (Q2FZ25)
Pfam (PF00318)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
36d30S ribosomal protein S3polymer21724143.91UniProt (Q2FW12)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
37e30S ribosomal protein S4polymer20023051.41UniProt (Q2FXK6)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
38f30S ribosomal protein S5polymer16617770.51UniProt (Q2FW23)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
39g30S ribosomal protein S6polymer9811613.11UniProt (Q2G113)
Pfam (PF01250)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
40h30S ribosomal protein S7polymer15617826.61UniProt (P48940)
Pfam (PF00177)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
41i30S ribosomal protein S8polymer13214854.31UniProt (Q2FW20)
Pfam (PF00410)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
42j30S ribosomal protein S9polymer13214857.01UniProt (Q2FW39)
Pfam (PF00380)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
43k30S ribosomal protein S10polymer10211598.51UniProt (A0A0D1JTN2)
Pfam (PF00338)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
44l30S ribosomal protein S11polymer12913908.01UniProt (Q2FW31)
Pfam (PF00411)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
45m30S ribosomal protein S12polymer13715320.91UniProt (P0A0H0)
Pfam (PF00164)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
46n30S ribosomal protein S13polymer12113747.91UniProt (Q2FW30)
Pfam (PF00416)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
47o30S ribosomal protein S14 type Zpolymer617317.81UniProt (Q2FW19)
Pfam (PF00253)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
48p30S ribosomal protein S15polymer8910634.31UniProt (Q2G2Q1)
Pfam (PF00312)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
49q30S ribosomal protein S16polymer9110253.91UniProt (Q2FZ45)
Pfam (PF00886)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
50r30S ribosomal protein S17polymer8710196.91UniProt (Q2FW15)
Pfam (PF00366)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
51s30S ribosomal protein S18polymer809332.01UniProt (Q2G111)
Pfam (PF01084)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
52t30S ribosomal protein S19polymer9210639.31UniProt (Q2FW10)
Pfam (PF00203)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
53u30S ribosomal protein S20polymer839039.51UniProt (Q2FXY6)
Pfam (PF01649)
In PDB		Staphylococcus aureus subsp. aureus NCTC 8325
545, 9, oZINC IONnon-polymer65.43Chemie (ZN)
55A, 8, E, F, aMAGNESIUM IONnon-polymer24.3145Chemie (MG)
56ASPERMIDINEnon-polymer145.21Chemie (SPD)
57A1,4-DIAMINOBUTANEnon-polymer88.21Chemie (PUT)
58EGUANOSINE-5'-DIPHOSPHATEnon-polymer443.21Chemie (GDP)
59E2-[(3~{R},4~{S},5~{S},8~{S},9~{S},10~{S},11~{R},13~{S},14~{S},16~{S})-16-acetyloxy-4,8,10,14-tetramethyl-3,11-bis(oxidanyl)-1,2,3,4,5,6,7,9,11,12,13,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]-5-cyclopentyl-pentanoic acidnon-polymer546.81Chemie (WUX)
60PPOTASSIUM IONnon-polymer39.11Chemie (K)
61waterwater18.01619Chemie (HOH)
Sequence modifications
5: 1 - 57 (UniProt: Q2FZF1)
PDBExternal DatabaseDetails
-Arg 35deletion
A: 1 - 2923 (GenBank: CP000253)
PDBExternal DatabaseDetails
G 48A 450786conflict
U 1584A 452322conflict
G 2261A 452999conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains54
Total formula weight2270218.1
Non-Polymers*Number of molecules153
Total formula weight4982.9
All*Total formula weight2275201.0
*Water molecules are not included.

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon