8OX1
Structure of TRF1core in complex with telomeric nucleosome
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, E | Histone H3.1 | polymer | 140 | 15805.6 | 2 | UniProt (P68431) Pfam (PF00125) In PDB | Homo sapiens (human) | Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l |
| 2 | B, F | Histone H4 | polymer | 107 | 11762.8 | 2 | UniProt (P62805) Pfam (PF15511) In PDB | Homo sapiens (human) | |
| 3 | C, G | Histone H2A type 1-C | polymer | 134 | 14503.9 | 2 | UniProt (Q93077) Pfam (PF00125) Pfam (PF16211) In PDB | Homo sapiens (human) | H2A-clustered histone 6,Histone H2A/l |
| 4 | D, H | Histone H2B type 1-C/E/F/G/I | polymer | 130 | 14305.6 | 2 | UniProt (P62807) Pfam (PF00125) In PDB | Homo sapiens (human) | Histone H2B.1 A,Histone H2B.a,H2B/a,Histone H2B.g,H2B/g,Histone H2B.h,H2B/h,Histone H2B.k,H2B/k,Histone H2B.l,H2B/l |
| 5 | I | Telomeric DNA C strand | polymer | 145 | 43478.9 | 1 | Homo sapiens (human) | ||
| 6 | J | Telomeric DNA G strand | polymer | 145 | 46024.3 | 1 | Homo sapiens (human) | ||
| 7 | L | Telomeric repeat-binding factor 1 | polymer | 439 | 50322.6 | 1 | UniProt (P54274) Pfam (PF08558) Pfam (PF00249) In PDB | Homo sapiens (human) | NIMA-interacting protein 2,TTAGGG repeat-binding factor 1,Telomeric protein Pin2/TRF1 |
| 8 | M | Telomeric repeat-binding factor 1 | polymer | 439 | 50562.6 | 1 | UniProt (P54274) Pfam (PF08558) Pfam (PF00249) In PDB | Homo sapiens (human) | NIMA-interacting protein 2,TTAGGG repeat-binding factor 1,Telomeric protein Pin2/TRF1 |
| 9 | water | water | 18.0 | 11 | Chemie (HOH) |
Sequence modifications
A, E: 0 - 135 (UniProt: P68431)
B, F: 0 - 102 (UniProt: P62805)
C, G: 0 - 129 (UniProt: Q93077)
D, H: -3 - 122 (UniProt: P62807)
| PDB | External Database | Details |
|---|---|---|
| Gly -4 | - | expression tag |
| Pro -3 | - | expression tag |
| Arg -2 | - | expression tag |
| Gly -1 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -4 | - | expression tag |
| Pro -3 | - | expression tag |
| Arg -2 | - | expression tag |
| Gly -1 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -4 | - | expression tag |
| Pro -3 | - | expression tag |
| Arg -2 | - | expression tag |
| Gly -1 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -7 | - | expression tag |
| Pro -6 | - | expression tag |
| Arg -5 | - | expression tag |
| Gly -4 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 303144.4 | |
| All* | Total formula weight | 303144.4 |
