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SummaryStructural detailsExperimental detailsFunctional detailsSequence NeighborHistoryDownloads

8OO0

Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S ribosome

This is a non-PDB format compatible entry.
Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1128S rRNApolymer33371078730.11GenBank (7OLC_1)Thermochaetoides thermophila
2218S rRNApolymer1796578887.61GenBank (7OLC_2)Thermochaetoides thermophila DSM 1495
335S rRNApolymer12038596.91GenBank (7OLC_3)Thermochaetoides thermophila DSM 1495
445.8S rRNApolymer15650147.71GenBank (MT316345.1)Thermochaetoides thermophila DSM 1495
5APutative guanine nucleotide-binding proteinpolymer31635149.61UniProt (G0S9U0)
Pfam (PF00400)
In PDB		Thermochaetoides thermophila
6BHyaluronan/mRNA-binding protein domain-containing proteinpolymer30232667.91UniProt (G0S428)
Pfam (PF09598)
Pfam (PF04774)
In PDB		Thermochaetoides thermophila
7CRibosome-associated molecular chaperone SSB1polymer61467111.01UniProt (G0SCU5)
Pfam (PF00012)
In PDB		Thermochaetoides thermophilaHeat shock protein SSB1,Hsp70 chaperone Ssb
8LA60S ribosomal protein L2-like proteinpolymer25427598.91UniProt (G0S4P8)
Pfam (PF00181)
Pfam (PF03947)
In PDB		Thermochaetoides thermophila
9LB60S ribosomal protein L3-like proteinpolymer38844069.51UniProt (G0RXW1)
Pfam (PF00297)
In PDB		Thermochaetoides thermophila
10LC60S ribosomal protein L4-like proteinpolymer36539439.91UniProt (G0SFC3)
Pfam (PF00573)
Pfam (PF14374)
In PDB		Thermochaetoides thermophila
11LD60S ribosomal protein l5-like proteinpolymer30435034.61UniProt (G0SEG2)
Pfam (PF17144)
Pfam (PF14204)
In PDB		Thermochaetoides thermophila
12LE60S ribosomal protein L6polymer20022133.01UniProt (G0S0D6)
Pfam (PF01159)
In PDB		Thermochaetoides thermophila
13LF60S ribosomal protein l7-like proteinpolymer24928821.81UniProt (G0SFL0)
Pfam (PF08079)
Pfam (PF00327)
In PDB		Thermochaetoides thermophila
14LG60S ribosomal protein L8polymer26229744.51UniProt (G0SAJ9)
Pfam (PF01248)
In PDB		Thermochaetoides thermophila
15LH60S ribosomal protein l9-like proteinpolymer19221582.11UniProt (G0S0E5)
Pfam (PF00347)
In PDB		Thermochaetoides thermophila
16LI60S ribosomal protein L10-like proteinpolymer21925255.41UniProt (G0SEI1)
Pfam (PF00252)
In PDB		Thermochaetoides thermophila
17LJPutative ribosomal proteinpolymer17320119.31UniProt (G0SHQ2)
Pfam (PF00281)
Pfam (PF00673)
In PDB		Thermochaetoides thermophila
18LK60S ribosomal protein L12-like proteinpolymer16517802.71UniProt (G0SGH8)
Pfam (PF03946)
Pfam (PF00298)
In PDB		Thermochaetoides thermophila
19LL60S ribosomal protein L13polymer21324191.21UniProt (G0S992)
Pfam (PF01294)
In PDB		Thermochaetoides thermophila
20LM60S ribosomal protein L14-like proteinpolymer14216111.91UniProt (G0S1R0)
Pfam (PF01929)
In PDB		Thermochaetoides thermophila
21LNRibosomal protein L15polymer20324307.31UniProt (G0RZ88)
Pfam (PF00827)
In PDB		Thermochaetoides thermophila
22LO60S ribosomal protein L16-like proteinpolymer20423035.21UniProt (G0SH61)
Pfam (PF00572)
In PDB		Thermochaetoides thermophila
23LP60S ribosomal protein l17-like proteinpolymer18620941.01UniProt (G0SGY1)
Pfam (PF00237)
In PDB		Thermochaetoides thermophila
24LQRibosomal protein L18-like proteinpolymer21324195.51UniProt (G0S9B5)
Pfam (PF17135)
In PDB		Thermochaetoides thermophila
25LRRibosomal protein L19polymer19222409.21UniProt (G0S9T3)
Pfam (PF01280)
In PDB		Thermochaetoides thermophila
26LS60S ribosomal protein L20polymer17420341.91UniProt (G0SCE2)
Pfam (PF01775)
In PDB		Thermochaetoides thermophila
27LT60S ribosomal protein l21-like proteinpolymer16018159.21UniProt (G0S0Z3)
Pfam (PF01157)
In PDB		Thermochaetoides thermophila
28LU60S ribosomal protein L22-like proteinpolymer12714302.61UniProt (G0SDS8)
Pfam (PF01776)
In PDB		Thermochaetoides thermophila
29LV60S ribosomal protein l23-like proteinpolymer13914674.41UniProt (G0SI44)
Pfam (PF00238)
In PDB		Thermochaetoides thermophila
30LW60S ribosomal protein L24polymer16118081.11UniProt (G2Q623)
Pfam (PF01246)
In PDB		Thermochaetoides thermophila
31LX60S ribosomal protein L25-like proteinpolymer15617175.31UniProt (G0S507)
Pfam (PF03939)
Pfam (PF00276)
In PDB		Thermochaetoides thermophila
32LY60S ribosomal protein L26-like proteinpolymer13815565.31UniProt (G0RYN9)
Pfam (PF16906)
Pfam (PF00467)
In PDB		Thermochaetoides thermophila
33LZ60S ribosomal protein L27polymer13515803.71UniProt (G0RZE9)
Pfam (PF01777)
In PDB		Thermochaetoides thermophila
34LaRibosomal protein L18e/L15P domain-containing proteinpolymer14916848.51UniProt (G2QB77)
Pfam (PF00828)
In PDB		Thermochaetoides thermophila
35Lb60S ribosomal protein L29polymer657529.71UniProt (Q2H9W4)
Pfam (PF01779)
In PDB		Thermochaetoides thermophila
36Lc60S ribosomal protein l30-like proteinpolymer10811602.61UniProt (G0SEI0)
Pfam (PF01248)
In PDB		Thermochaetoides thermophila
37LdPutative 60S ribosomal proteinpolymer12013872.21UniProt (G0SD68)
Pfam (PF01198)
In PDB		Thermochaetoides thermophila
38Le60S ribosomal protein L32-like proteinpolymer13115096.01UniProt (G0S6V4)
Pfam (PF01655)
In PDB		Thermochaetoides thermophila
39Lf60S ribosomal protein l33-like proteinpolymer10912330.31UniProt (G0SCL3)
Pfam (PF01247)
In PDB		Thermochaetoides thermophila
40LgRibosomal protein l34-like proteinpolymer11913493.01UniProt (G0SFN0)
Pfam (PF01199)
In PDB		Thermochaetoides thermophila
41Lhdolichyl-diphosphooligosaccharide--protein glycotransferasepolymer12614643.41UniProt (G0S0D7)
Pfam (PF00831)
In PDB		Thermochaetoides thermophila
42Li60S ribosomal protein L36polymer11012784.11UniProt (G0SBN1)
Pfam (PF01158)
In PDB		Thermochaetoides thermophila
43LjRibosomal protein L37polymer9510660.51UniProt (G0S101)
Pfam (PF01907)
In PDB		Thermochaetoides thermophila
44Lk60S ribosomal protein L38polymer809466.31UniProt (G2Q8J4)
Pfam (PF01781)
In PDB		Thermochaetoides thermophila
45Ll60S ribosomal protein L39polymer516297.51UniProt (Q2H9R2)
Pfam (PF00832)
In PDB		Thermochaetoides thermophila
46LmUbiquitin-like domain-containing proteinpolymer12814609.21UniProt (A0A2A9PNA8)
Pfam (PF00240)
Pfam (PF01020)
In PDB		Thermochaetoides thermophila
47Ln, Lr60S ribosomal protein L41-Apolymer253354.22UniProt (P0CX86)
Pfam (PF05162)
In PDB		Thermochaetoides thermophilaL47,Large ribosomal subunit protein eL41-A,YL41
48Lo60S ribosomal protein L44-like proteinpolymer10612045.51UniProt (G0SBZ6)
Pfam (PF00935)
In PDB		Thermochaetoides thermophila
49Lp60S ribosomal protein L43-like proteinpolymer9210159.01UniProt (G0S6B0)
Pfam (PF01780)
In PDB		Thermochaetoides thermophila
50LqPutative 60S ribosomal proteinpolymer14715960.51UniProt (G0SHJ6)
Pfam (PF01778)
In PDB		Thermochaetoides thermophila
51Ls60S acidic ribosomal protein P0polymer31233853.61UniProt (G0SGP3)
Pfam (PF00466)
Pfam (PF17777)
Pfam (PF00428)
In PDB		Thermochaetoides thermophila
52SA40S ribosomal protein S0polymer28531159.01UniProt (G0RYF9)
Pfam (PF00318)
In PDB		Thermochaetoides thermophila
53SB40S ribosomal protein S1polymer25529245.21UniProt (G0S7T8)
Pfam (PF01015)
In PDB		Thermochaetoides thermophila
54SC40S ribosomal protein S2-like proteinpolymer26328556.11UniProt (G0SAV4)
Pfam (PF00333)
Pfam (PF03719)
In PDB		Thermochaetoides thermophila
55SD40S ribosomal protein S3-like proteinpolymer25427893.01UniProt (G0S6I7)
Pfam (PF07650)
Pfam (PF00189)
In PDB		Thermochaetoides thermophila
56SE40S ribosomal protein S4polymer26429800.81UniProt (G0S1A6)
Pfam (PF08071)
Pfam (PF00900)
Pfam (PF00467)
Pfam (PF16121)
In PDB		Thermochaetoides thermophila
57SF40S ribosomal protein s5-like proteinpolymer21223679.21UniProt (G0S1Z0)
Pfam (PF00177)
In PDB		Thermochaetoides thermophila
58SG40S ribosomal protein S6polymer23927490.11UniProt (G0RY43)
Pfam (PF01092)
In PDB		Thermochaetoides thermophila
59SH40S ribosomal protein S7polymer20323084.71UniProt (G0S8C4)
Pfam (PF01251)
In PDB		Thermochaetoides thermophila
60SI40S ribosomal protein S8polymer20223102.41UniProt (G0RY45)
Pfam (PF01201)
In PDB		Thermochaetoides thermophila
61SJ40S ribosomal protein s9-like proteinpolymer19022029.81UniProt (G0S0Z4)
Pfam (PF00163)
Pfam (PF01479)
In PDB		Thermochaetoides thermophila
62SK40S ribosomal protein s10-like proteinpolymer15918121.51UniProt (G0RZD8)
Pfam (PF03501)
In PDB		Thermochaetoides thermophila
63SL40S ribosomal protein S11-like proteinpolymer16118698.21UniProt (G0SF00)
Pfam (PF16205)
Pfam (PF00366)
In PDB		Thermochaetoides thermophila
64SM40S ribosomal protein S12polymer14415961.31UniProt (G0SHH9)
Pfam (PF01248)
In PDB		Thermochaetoides thermophila
65SN40S ribosomal protein S13-like proteinpolymer15116912.91UniProt (G0RZM9)
Pfam (PF08069)
Pfam (PF00312)
In PDB		Thermochaetoides thermophila
66SO40S ribosomal protein S14-like proteinpolymer15016071.51UniProt (G0SFL1)
Pfam (PF00411)
In PDB		Thermochaetoides thermophila
67SP40S ribosomal protein s15-like proteinpolymer15317601.61UniProt (G0S084)
Pfam (PF00203)
In PDB		Thermochaetoides thermophila
68SQ40S ribosomal protein S16-like proteinpolymer14315962.81UniProt (G0SBR7)
Pfam (PF00380)
In PDB		Thermochaetoides thermophila
69SR40S ribosomal protein S17-like proteinpolymer14316720.21UniProt (G0S871)
Pfam (PF00833)
In PDB		Thermochaetoides thermophila
70SSPutative ribosomal proteinpolymer15617826.71UniProt (G0S6J7)
Pfam (PF00416)
In PDB		Thermochaetoides thermophila
71ST40S ribosomal protein S19-like proteinpolymer15317151.31UniProt (G0SFK8)
Pfam (PF01090)
In PDB		Thermochaetoides thermophila
72SU40S ribosomal protein S20-like proteinpolymer11613212.61UniProt (G0S379)
Pfam (PF00338)
In PDB		Thermochaetoides thermophila
73SV40S ribosomal protein S21-like proteinpolymer9810961.51UniProt (G0SI21)
Pfam (PF01249)
In PDB		Thermochaetoides thermophila
74SW40S ribosomal protein S22-like proteinpolymer13014905.51UniProt (G0SHI0)
Pfam (PF00410)
In PDB		Thermochaetoides thermophila
75SX40S ribosomal protein s23-like proteinpolymer14515934.71UniProt (G0RY17)
Pfam (PF00164)
In PDB		Thermochaetoides thermophila
76SY40S ribosomal protein S24polymer13615535.31UniProt (P0CU28)
Pfam (PF01282)
In PDB		Thermochaetoides thermophila
77SZ40S ribosomal protein S25polymer9910932.91UniProt (G0S1Y9)
Pfam (PF03297)
In PDB		Thermochaetoides thermophila
78Sa40S ribosomal protein S26polymer11913616.21UniProt (G0S2X4)
Pfam (PF01283)
In PDB		Thermochaetoides thermophila
79SbRibosomal protein s27-like proteinpolymer828923.61UniProt (G0S1S4)
Pfam (PF01667)
In PDB		Thermochaetoides thermophila
80Sc40S ribosomal protein S28-like proteinpolymer687742.01UniProt (G0S9M9)
Pfam (PF01200)
In PDB		Thermochaetoides thermophila
81Sd40S ribosomal protein S29polymer566504.61UniProt (Q2HB68)
Pfam (PF00253)
In PDB		Thermochaetoides thermophila
82Se40S ribosomal protein S30polymer616793.11UniProt (Q2H4C5)
Pfam (PF04758)
In PDB		Thermochaetoides thermophila
83Sf40S ribosomal protein S27a-like proteinpolymer15417731.81UniProt (G0S2X5)
Pfam (PF00240)
Pfam (PF01599)
In PDB		Thermochaetoides thermophila
84DMethionine aminopeptidase 2polymer37141310.41UniProt (G0SEA9)
Pfam (PF00557)
In PDB		Thermochaetoides thermophila
85Lg, Lj, Lm, Lo, Lp...ZINC IONnon-polymer65.48Chemie (ZN)
Sequence modifications
1: 1 - 3337 (GenBank: 7OLC_1)
PDBExternal DatabaseDetails
Omg 2578N 2578conflict
2: 1 - 1796 (GenBank: 7OLC_2)
PDBExternal DatabaseDetails
U 1N 1conflict
B8n 1188N 1188conflict
3: 1 - 120 (GenBank: 7OLC_3)
PDBExternal DatabaseDetails
A 1N 1conflict
LH: 1 - 15 (UniProt: G0S0E5)
LH: 53 - 229 (UniProt: G0S0E5)
LW: 1 - 161 (UniProt: G2Q623)
PDBExternal DatabaseDetails
Glu 5Asp 5conflict
Thr 7Ser 7conflict
Asn 102Ser 102conflict
Ala 117Gln 117conflict
Pro 139Ala 139conflict
Gln 140Ala 140conflict
Val 154Ile 154conflict
Ala 157Gln 157conflict
La: 1 - 149 (UniProt: G2QB77)
PDBExternal DatabaseDetails
Arg 70Ala 70conflict
Ser 72Thr 72conflict
Ser 84Ala 84conflict
Asp 85Glu 85conflict
Val 86Thr 86conflict
Gln 94Ala 94conflict
Lys 96Thr 96conflict
Glu 120Gln 120conflict
Val 123Phe 123conflict
Lys 139Thr 139conflict
Lk: 1 - 80 (UniProt: G2Q8J4)
PDBExternal DatabaseDetails
Val 5Ile 5conflict
Ser 6Gly 6conflict
Asp 53Glu 53conflict
Lys 78Ser 78conflict
Lm: 1 - 128 (UniProt: A0A2A9PNA8)
PDBExternal DatabaseDetails
Glu 24Asp 74conflict
Ala 28Ser 78conflict
Se: 2 - 62 (UniProt: Q2H4C5)
PDBExternal DatabaseDetails
Ala 4-insertion
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains85
Total formula weight3341319.8
Non-Polymers*Number of molecules8
Total formula weight523.3
All*Total formula weight3341843.1
*Water molecules are not included.

222036

PDB entries from 2024-07-03

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