8OHN
Human Coronavirus HKU1 spike glycoprotein
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C | Spike glycoprotein | polymer | 1326 | 147770.3 | 3 | UniProt (E0YJ44) Pfam (PF16451) Pfam (PF09408) Pfam (PF19209) Pfam (PF01601) In PDB | Human coronavirus HKU1 | S glycoprotein,E2,Peplomer protein |
2 | a, b, c, D, d... | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 24 | In PDB GlyTouCan (G42666HT) | |||
3 | G, P, Y | beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 586.5 | 3 | In PDB GlyTouCan (G15407YE) | |||
4 | C, A, B | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 30 | Chemie (NAG) |
Sequence modifications
A, B, C: 12 - 755 (UniProt: E0YJ44)
A, B, C: 761 - 1265 (UniProt: E0YJ44)
PDB | External Database | Details |
---|---|---|
Met -10 | - | initiating methionine |
Pro -9 | - | expression tag |
Met -8 | - | expression tag |
Gly -7 | - | expression tag |
Ser -6 | - | expression tag |
Leu -5 | - | expression tag |
Gln -4 | - | expression tag |
Pro -3 | - | expression tag |
Leu -2 | - | expression tag |
Ala -1 | - | expression tag |
Thr 0 | - | expression tag |
Leu 1 | - | expression tag |
Tyr 2 | - | expression tag |
Leu 3 | - | expression tag |
Leu 4 | - | expression tag |
Gly 5 | - | expression tag |
Met 6 | - | expression tag |
Leu 7 | - | expression tag |
Val 8 | - | expression tag |
Ala 9 | - | expression tag |
Ser 10 | - | expression tag |
Val 11 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly 756 | - | linker |
Gly 757 | - | linker |
Ser 758 | - | linker |
Gly 759 | - | linker |
Ser 760 | - | linker |
Leu 1266 | - | expression tag |
Leu 1267 | - | expression tag |
Ile 1268 | - | expression tag |
Lys 1269 | - | expression tag |
Arg 1270 | - | expression tag |
Met 1271 | - | expression tag |
Lys 1272 | - | expression tag |
Gln 1273 | - | expression tag |
Ile 1274 | - | expression tag |
Glu 1275 | - | expression tag |
Asp 1276 | - | expression tag |
Lys 1277 | - | expression tag |
Ile 1278 | - | expression tag |
Glu 1279 | - | expression tag |
Glu 1280 | - | expression tag |
Ile 1281 | - | expression tag |
Glu 1282 | - | expression tag |
Ser 1283 | - | expression tag |
Lys 1284 | - | expression tag |
Gln 1285 | - | expression tag |
Lys 1286 | - | expression tag |
Lys 1287 | - | expression tag |
Ile 1288 | - | expression tag |
Glu 1289 | - | expression tag |
Asn 1290 | - | expression tag |
Glu 1291 | - | expression tag |
Ile 1292 | - | expression tag |
Ala 1293 | - | expression tag |
Arg 1294 | - | expression tag |
Ile 1295 | - | expression tag |
Lys 1296 | - | expression tag |
Lys 1297 | - | expression tag |
Ile 1298 | - | expression tag |
Lys 1299 | - | expression tag |
Leu 1300 | - | expression tag |
Val 1301 | - | expression tag |
Pro 1302 | - | expression tag |
Arg 1303 | - | expression tag |
Gly 1304 | - | expression tag |
Ser 1305 | - | expression tag |
Leu 1306 | - | expression tag |
Glu 1307 | - | expression tag |
Trp 1308 | - | expression tag |
Ser 1309 | - | expression tag |
His 1310 | - | expression tag |
Pro 1311 | - | expression tag |
Gln 1312 | - | expression tag |
Phe 1313 | - | expression tag |
Glu 1314 | - | expression tag |
Lys 1315 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 443311.0 | |
Branched | Number of molecules | 27 |
Total formula weight | 11945.3 | |
Non-Polymers* | Number of molecules | 30 |
Total formula weight | 6636.2 | |
All* | Total formula weight | 461892.5 |