8KIE
Structure of YchF with 50S ribosomal subunit (local map)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | y | Ribosome-binding ATPase YchF | polymer | 379 | 41651.3 | 1 | UniProt (P0ABU2) Pfam (PF01926) Pfam (PF06071) In PDB | Escherichia coli | |
2 | a | 23S rRNA (partial) | polymer | 2904 | 941663.4 | 1 | Escherichia coli | ||
3 | j | 50S ribosomal protein L14 | polymer | 123 | 13565.1 | 1 | UniProt (P0ADY3) Pfam (PF00238) In PDB | Escherichia coli | Large ribosomal subunit protein uL14 |
4 | o | 50S ribosomal protein L19 | polymer | 115 | 13159.3 | 1 | UniProt (P0A7K6) Pfam (PF01245) In PDB | Escherichia coli | Large ribosomal subunit protein bL19 |
5 | a | MAGNESIUM ION | non-polymer | 24.3 | 30 | Chemie (MG) |
Sequence modifications
y: 1 - 363 (UniProt: P0ABU2)
PDB | External Database | Details |
---|---|---|
Met -15 | - | initiating methionine |
Gly -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
His -9 | - | expression tag |
His -8 | - | expression tag |
Glu -7 | - | expression tag |
Asn -6 | - | expression tag |
Leu -5 | - | expression tag |
Tyr -4 | - | expression tag |
Phe -3 | - | expression tag |
Gln -2 | - | expression tag |
Gly -1 | - | expression tag |
His 0 | - | expression tag |
Ala 114 | His 114 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 1010039.1 | |
Non-Polymers* | Number of molecules | 30 |
Total formula weight | 729.1 | |
All* | Total formula weight | 1010768.2 |