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8KI3

Structure of the human ATP synthase bound to bedaquiline (composite)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
ATP synthase subunit alpha, mitochondrialpolymer51055276.23UniProt (P25705)
Pfam (PF02874)
Pfam (PF00006)
Pfam (PF00306)
Homo sapiens (human)ATP synthase F1 subunit alpha
2D, E, F
(D, E, F)
ATP synthase subunit beta, mitochondrialpolymer48251822.03UniProt (P06576)
Pfam (PF02874)
Pfam (PF00006)
Pfam (PF22919)
Homo sapiens (human)
3G
(G)
ATP synthase subunit gamma, mitochondrialpolymer27330207.81UniProt (P36542)
Pfam (PF00231)
Homo sapiens (human)ATP synthase F1 subunit gamma,F-ATPase gamma subunit
4H
(J)
ATPase inhibitor, mitochondrialpolymer819540.61UniProt (Q9UII2)
Pfam (PF04568)
Homo sapiens (human)ATP synthase F1 subunit epsilon,Inhibitor of F(1)F(o)-ATPase,IF(1),IF1
5I
(O)
ATP synthase subunit O, mitochondrialpolymer19020904.51UniProt (P48047)
Pfam (PF00213)
Homo sapiens (human)ATP synthase peripheral stalk subunit OSCP,Oligomycin sensitivity conferral protein,OSCP
6J, K, L, M, N...
(1, 2, 3, 4, 5...)
ATP synthase F(0) complex subunit C1, mitochondrialpolymer757611.08UniProt (P05496)
Pfam (PF00137)
Homo sapiens (human)ATP synthase lipid-binding protein,ATP synthase membrane subunit c locus 1,ATP synthase proteolipid P1,ATP synthase proton-transporting mitochondrial F(0) complex subunit C1,ATPase protein 9,ATPase subunit c
7R
(H)
ATP synthase subunit delta, mitochondrialpolymer14615029.81UniProt (P30049)
Pfam (PF21335)
Pfam (PF02823)
Homo sapiens (human)ATP synthase F1 subunit delta,F-ATPase delta subunit
8S
(I)
ATP synthase subunit epsilon, mitochondrialpolymer515790.81UniProt (P56381)
Pfam (PF04627)
Homo sapiens (human)ATPase subunit epsilon,ATP synthase F1 subunit epsilon
9T
(K)
ATP synthase F(0) complex subunit B1, mitochondrialpolymer21424658.61UniProt (P24539)
Pfam (PF05405)
Homo sapiens (human)ATP synthase peripheral stalk-membrane subunit b,ATP synthase proton-transporting mitochondrial F(0) complex subunit B1,ATP synthase subunit b,ATPase subunit b
10U
(M)
ATP synthase subunit d, mitochondrialpolymer16018384.01UniProt (O75947)
Pfam (PF05873)
Homo sapiens (human)ATPase subunit d,ATP synthase peripheral stalk subunit d
11V
(N)
ATP synthase subunit apolymer22624833.11UniProt (P00846)
Pfam (PF00119)
Homo sapiens (human)F-ATPase protein 6
12W
(P)
ATP synthase subunit ATP5MJ, mitochondrialpolymer586673.11UniProt (P56378)
Pfam (PF08039)
Homo sapiens (human)6.8 kDa mitochondrial proteolipid protein,MLQ,ATP synthase membrane subunit 6.8PL
13X
(Q)
ATP synthase protein 8polymer688000.61UniProt (P03928)
Pfam (PF00895)
Homo sapiens (human)A6L,F-ATPase subunit 8
14Y
(R)
ATP synthase subunit f, mitochondrialpolymer9310804.71UniProt (P56134)
Pfam (PF10206)
Homo sapiens (human)ATP synthase membrane subunit f
15Z
(S)
ATP synthase subunit g, mitochondrialpolymer10211309.21UniProt (O75964)
Pfam (PF04718)
Homo sapiens (human)ATPase subunit g,ATP synthase membrane subunit g
16AA
(T)
ATP synthase subunit e, mitochondrialpolymer697947.21UniProt (P56385)
Pfam (PF05680)
Homo sapiens (human)ATPase subunit e,ATP synthase membrane subunit e
17BA
(L)
ATP synthase-coupling factor 6, mitochondrialpolymer10812606.51UniProt (P18859)
Pfam (PF05511)
Homo sapiens (human)ATPase subunit F6,ATP synthase peripheral stalk subunit F6
18CA, EA, GA
(A, B, C)
ADENOSINE-5'-TRIPHOSPHATEnon-polymer507.23Chemie (ATP)
19DA, FA, HA, JA, LA
(A, B, C, D, F)
MAGNESIUM IONnon-polymer24.35Chemie (MG)
20IA, KA
(D, F)
ADENOSINE-5'-DIPHOSPHATEnon-polymer427.22Chemie (ADP)
21MA
(4)
Bedaquilinenon-polymer555.51Chemie (BQ1)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains28
Total formula weight588872.5
Non-Polymers*Number of molecules11
Total formula weight3053.0
All*Total formula weight591925.4
*Water molecules are not included.

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PDB entries from 2025-06-11

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