8KEV
Cryo-EM structure of HRD1-SEL1L-XTP3B (state D1) complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D (D, C) | Protein sel-1 homolog 1 | polymer | 794 | 88848.5 | 2 | UniProt (Q9UBV2) Pfam (PF08238) Pfam (PF00040) | Homo sapiens (human) | Suppressor of lin-12-like protein 1,Sel-1L |
| 2 | B, E (G, H) | Ala-Asn-Ala | polymer | 3 | 274.3 | 2 | Homo sapiens (human) | ||
| 3 | C, F (E, F) | Endoplasmic reticulum lectin 1 | polymer | 483 | 54931.1 | 2 | UniProt (Q96DZ1) Pfam (PF07915) | Homo sapiens (human) | ER lectin,Erlectin,XTP3-transactivated gene B protein |
| 4 | G, H (A, B) | E3 ubiquitin-protein ligase synoviolin | polymer | 617 | 67744.6 | 2 | UniProt (Q86TM6) Pfam (PF13639) | Homo sapiens (human) | RING-type E3 ubiquitin transferase synoviolin,Synovial apoptosis inhibitor 1 |
| 5 | I, J (I, J) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-4)]alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1235.1 | 2 | In PDB | |||
| 6 | K, L, M, N, O... (D, C) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 423596.9 | |
| Branched | Number of molecules | 2 |
| Total formula weight | 2470.2 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 1327.2 | |
| All* | Total formula weight | 427394.4 |
