8K5O
Cryo-EM structure of the RC-LH core comples from Halorhodospira halochloris
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (C) | Photosynthetic reaction center cytochrome c subunit | polymer | 372 | 41612.9 | 1 | UniProt (A0A0X8X829) Pfam (PF02276) | Halorhodospira halochloris | |
| 2 | B (L) | Reaction center protein L chain | polymer | 279 | 31115.0 | 1 | UniProt (A0A0X8XAH6) Pfam (PF00124) | Halorhodospira halochloris | |
| 3 | C (M) | Reaction center protein M chain | polymer | 320 | 36221.7 | 1 | UniProt (A0A0X8X847) Pfam (PF00124) | Halorhodospira halochloris | |
| 4 | D (H) | Photosynthetic reaction center H subunit | polymer | 274 | 31293.8 | 1 | UniProt (A0A0X8X838) Pfam (PF03967) Pfam (PF05239) | Halorhodospira halochloris | |
| 5 | E (4) | Antenna complex alpha/beta subunit domain-containing protein | polymer | 105 | 12053.3 | 1 | UniProt (A0A110B4Z6) Pfam (PF00556) | Halorhodospira halochloris | |
| 6 | F (3) | Light-harvesting LHI | polymer | 65 | 7562.9 | 1 | UniProt (A0A120MZP7) Pfam (PF00556) | Halorhodospira halochloris | |
| 7 | BA, EA, G, HA, J... (w, Y, b, k, n...) | Antenna complex alpha/beta subunit domain-containing protein | polymer | 65 | 7696.8 | 16 | UniProt (A0A0X8XBE4) Pfam (PF00556) | Halorhodospira halochloris | |
| 8 | AB, CA, FA, H, IA... (x, Z, c, l, o...) | Beta subunit of light-harvesting 1 | polymer | 86 | 9555.7 | 16 | UniProt (A0A0X8X9B2) | Halorhodospira halochloris | |
| 9 | AA, BB, DA, GA, I... (v, X, a, j, m...) | Gamma subunit of light-harvesting 1 | polymer | 29 | 3123.8 | 16 | Halorhodospira halochloris | ||
| 10 | CB (2) | reaction center small polypeptide | polymer | 31 | 3531.3 | 1 | Halorhodospira halochloris | ||
| 11 | DB (9) | reactin center small polypeptide | polymer | 33 | 3762.5 | 1 | Halorhodospira halochloris | ||
| 12 | EB, FB, GB, HB (C) | HEME C | non-polymer | 618.5 | 4 | Chemie (HEC) | |||
| 13 | AF, BE, BH, CC, CD... (s, k, R, M, v...) | (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE | non-polymer | 749.0 | 50 | Chemie (PGV) | |||
| 14 | JB (C) | 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE | non-polymer | 723.0 | 1 | Chemie (LHG) | |||
| 15 | BF, CE, CF, CG, CH... (z, l, N, V, Y...) | Trans-Geranyl Bacteriochlorophyll B | non-polymer | 907.5 | 54 | Chemie (A1LZM) | |||
| 16 | OB, ZB (L, M) | Trans-Geranyl Bacteriopheophytin B | non-polymer | 885.2 | 2 | Chemie (A1LZP) | |||
| 17 | PB (L) | Ubiquinone-8 | non-polymer | 727.1 | 1 | Chemie (UQ8) | |||
| 18 | AD, AE, AG, AH, AI... (v, k, K, R, g...) | UNKNOWN LIGAND | non-polymer | 909.5 | 57 | Chemie (UNL) | |||
| 19 | WB (M) | FE (III) ION | non-polymer | 55.8 | 1 | Chemie (FE) | |||
| 20 | AC, BC (M) | MENAQUINONE 8 | non-polymer | 717.1 | 2 | Chemie (MQ8) | |||
| 21 | EC, FC, MC (M, H) | CARDIOLIPIN | non-polymer | 1464.0 | 3 | Chemie (CDL) | |||
| 22 | SC (3) | LYCOPENE | non-polymer | 536.9 | 1 | Chemie (LYC) | |||
| 23 | DE, DG, FF, GH, ID... (l, N, 1, W, Z...) | Trans-Geranyl 8-vinyl-bacteriochlorophyll B | non-polymer | 907.5 | 16 | Chemie (A1LZQ) | |||
| 24 | BG (K) | DI-PALMITOYL-3-SN-PHOSPHATIDYLETHANOLAMINE | non-polymer | 692.0 | 1 | Chemie (PEF) | |||
| 25 | VG, WH (S, h) | 2-O-octyl-beta-D-glucopyranose | non-polymer | 292.4 | 2 | Chemie (BGL) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 56 |
| Total formula weight | 493173.3 | |
| Non-Polymers* | Number of molecules | 195 |
| Total formula weight | 166204.4 | |
| All* | Total formula weight | 659377.7 |
