8JOZ
Crystal structure of CmoM from E. coli complexed with sinefungin and cellularly expressed tRNA Ser
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | tRNA 5-carboxymethoxyuridine methyltransferase | polymer | 282 | 32199.9 | 1 | UniProt (P36566) Pfam (PF13847) In PDB | Escherichia coli K-12 | cmo5U methyltransferase |
2 | B | tRNA Ser (88-MER) | polymer | 88 | 28648.3 | 1 | Escherichia coli K-12 | ||
3 | A | SINEFUNGIN | non-polymer | 381.4 | 1 | Chemie (SFG) | |||
4 | B | MAGNESIUM ION | non-polymer | 24.3 | 7 | Chemie (MG) | |||
5 | water | water | 18.0 | 351 | Chemie (HOH) |
Sequence modifications
A: 2 - 261 (UniProt: P36566)
PDB | External Database | Details |
---|---|---|
Met -15 | - | initiating methionine |
Arg -14 | - | expression tag |
Gly -13 | - | expression tag |
Ser -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
His -9 | - | expression tag |
His -8 | - | expression tag |
His -7 | - | expression tag |
His -6 | - | expression tag |
Thr -5 | - | expression tag |
Asp -4 | - | expression tag |
Pro -3 | - | expression tag |
Ala -2 | - | expression tag |
Leu -1 | - | expression tag |
Arg 0 | - | expression tag |
Ala 1 | - | expression tag |
Gly 262 | - | expression tag |
Leu 263 | - | expression tag |
Cys 264 | - | expression tag |
Gly 265 | - | expression tag |
Arg 266 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 60848.2 | |
Non-Polymers* | Number of molecules | 8 |
Total formula weight | 551.5 | |
All* | Total formula weight | 61399.7 |