8JKK
Crystal Structure of the dioxygenase CcTet from Coprinopsis cinerea bound to 12bp 5-methylcytosine (5mC) containing duplex DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, D, G, J | 2OGFeDO JBP1/TET oxygenase domain-containing protein | polymer | 415 | 46284.0 | 4 | UniProt (A8P1J0) Pfam (PF12851) In PDB | Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) (Hormographiella aspergillata) | |
| 2 | B, E, H, K | DNA (5'-D(P*CP*GP*AP*TP*CP*(5CM)P*GP*CP*TP*AP*CP*G)-3') | polymer | 12 | 3637.4 | 4 | Homo sapiens | ||
| 3 | C, F, I, L | DNA (5'-D(P*CP*GP*TP*AP*GP*CP*TP*GP*AP*TP*CP*G)-3') | polymer | 12 | 3678.4 | 4 | Homo sapiens | ||
| 4 | A, D, G, J | MANGANESE (II) ION | non-polymer | 54.9 | 4 | Chemie (MN) | |||
| 5 | A, D, G, J | N-OXALYLGLYCINE | non-polymer | 147.1 | 4 | Chemie (OGA) | |||
| 6 | water | water | 18.0 | 936 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 214399.0 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 808.1 | |
| All* | Total formula weight | 215207.1 |
