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8JKK

Crystal Structure of the dioxygenase CcTet from Coprinopsis cinerea bound to 12bp 5-methylcytosine (5mC) containing duplex DNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D, G, J
(A, D, G, J)
2OGFeDO JBP1/TET oxygenase domain-containing proteinpolymer41546284.04UniProt (A8P1J0)
Pfam (PF12851)
Coprinopsis cinerea (strain Okayama-7 / 130 / ATCC MYA-4618 / FGSC 9003) (Hormographiella aspergillata)
2B, E, H, K
(B, E, H, K)
DNA (5'-D(P*CP*GP*AP*TP*CP*(5CM)P*GP*CP*TP*AP*CP*G)-3')polymer123637.44Homo sapiens
3C, F, I, L
(C, F, I, L)
DNA (5'-D(P*CP*GP*TP*AP*GP*CP*TP*GP*AP*TP*CP*G)-3')polymer123678.44Homo sapiens
4M, O, Q, S
(A, D, G, J)
MANGANESE (II) IONnon-polymer54.94Chemie (MN)
5N, P, R, T
(A, D, G, J)
N-OXALYLGLYCINEnon-polymer147.14Chemie (OGA)
6AA, BA, CA, DA, EA...
(G, H, I, J, K...)
waterwater18.0936Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains12
Total formula weight214399.0
Non-Polymers*Number of molecules8
Total formula weight808.1
All*Total formula weight215207.1
*Water molecules are not included.

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PDB entries from 2026-02-11

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