8JHG
Native SUV420H1 bound to 167-bp nucleosome
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (K) | Histone-lysine N-methyltransferase KMT5B | polymer | 361 | 41330.7 | 1 | UniProt (Q4FZB7) Pfam (PF00856) | Homo sapiens (human) | Lysine N-methyltransferase 5B,Lysine-specific methyltransferase 5B,Suppressor of variegation 4-20 homolog 1,Su(var)4-20 homolog 1,Suv4-20h1,[histone H4]-N-methyl-L-lysine20 N-methyltransferase KMT5B,[histone H4]-lysine20 N-methyltransferase KMT5B |
2 | B, F (A, E) | Histone H3.1 | polymer | 136 | 15437.2 | 2 | UniProt (P68431) Pfam (PF00125) | Homo sapiens (human) | Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l |
3 | C, G (B, F) | Histone H4 | polymer | 86 | 9863.6 | 2 | UniProt (P62805) Pfam (PF15511) | Homo sapiens (human) | |
4 | D, H (C, G) | Histone H2A type 1-B/E | polymer | 115 | 12675.8 | 2 | UniProt (P04908) Pfam (PF00125) Pfam (PF16211) | Homo sapiens (human) | Histone H2A.2,Histone H2A/a,Histone H2A/m |
5 | E, I (D, H) | Histone H2B type 1-K | polymer | 95 | 10607.2 | 2 | UniProt (O60814) Pfam (PF00125) | Homo sapiens (human) | H2B K,HIRA-interacting protein 1 |
6 | J (I) | DNA (160-MER) | polymer | 160 | 49038.2 | 1 | Homo sapiens (human) | ||
7 | K (J) | DNA (160-MER) | polymer | 160 | 49745.7 | 1 | Homo sapiens (human) | ||
8 | L (K) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
9 | M (K) | S-ADENOSYLMETHIONINE | non-polymer | 398.4 | 1 | Chemie (SAM) |
Sequence modifications
B, F: 17 - 102 (UniProt: P62805)
PDB | External Database | Details |
---|---|---|
Met 20 | Lys 21 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 11 |
Total formula weight | 237282.1 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 463.8 | |
All* | Total formula weight | 237745.9 |