8JHF
Native SUV420H1 bound to 167-bp nucleosome
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | K | Histone-lysine N-methyltransferase KMT5B | polymer | 361 | 41330.7 | 1 | UniProt (Q4FZB7) Pfam (PF00856) In PDB | Homo sapiens (human) | Lysine N-methyltransferase 5B,Lysine-specific methyltransferase 5B,Suppressor of variegation 4-20 homolog 1,Su(var)4-20 homolog 1,Suv4-20h1,[histone H4]-N-methyl-L-lysine20 N-methyltransferase KMT5B,[histone H4]-lysine20 N-methyltransferase KMT5B |
| 2 | A, E | Histone H3.1 | polymer | 136 | 15437.2 | 2 | UniProt (P68431) Pfam (PF00125) In PDB | Homo sapiens (human) | Histone H3/a,Histone H3/b,Histone H3/c,Histone H3/d,Histone H3/f,Histone H3/h,Histone H3/i,Histone H3/j,Histone H3/k,Histone H3/l |
| 3 | B, F | Histone H4 | polymer | 86 | 9863.6 | 2 | UniProt (P62805) Pfam (PF15511) In PDB | Homo sapiens (human) | |
| 4 | C, G | Histone H2A.Z | polymer | 113 | 12219.2 | 2 | UniProt (P0C0S5) Pfam (PF00125) Pfam (PF16211) In PDB | Homo sapiens (human) | H2A/z |
| 5 | D, H | Histone H2B type 1-K | polymer | 95 | 10607.2 | 2 | UniProt (O60814) Pfam (PF00125) In PDB | Homo sapiens (human) | H2B K,HIRA-interacting protein 1 |
| 6 | I | DNA (160-MER) | polymer | 160 | 49038.2 | 1 | Homo sapiens (human) | ||
| 7 | J | DNA (160-MER) | polymer | 160 | 49745.7 | 1 | Homo sapiens (human) | ||
| 8 | K | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 9 | K | S-ADENOSYLMETHIONINE | non-polymer | 398.4 | 1 | Chemie (SAM) |
Sequence modifications
B, F: 17 - 102 (UniProt: P62805)
| PDB | External Database | Details |
|---|---|---|
| Met 20 | Lys 21 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 11 |
| Total formula weight | 236368.9 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 463.8 | |
| All* | Total formula weight | 236832.8 |
