8JBO
Crystal structure of TxGH116 from Thermoanaerobacterium xylanolyticum with isofagomine
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Glucosylceramidase | polymer | 798 | 91723.1 | 2 | UniProt (F6BL85) Pfam (PF12215) Pfam (PF04685) In PDB | Thermoanaerobacterium xylanolyticum LX-11 | |
2 | A, B | 5-HYDROXYMETHYL-3,4-DIHYDROXYPIPERIDINE | non-polymer | 147.2 | 2 | Chemie (IFM) | |||
3 | B, A | CALCIUM ION | non-polymer | 40.1 | 3 | Chemie (CA) | |||
4 | B, A | GLYCEROL | non-polymer | 92.1 | 20 | Chemie (GOL) | |||
5 | B, A | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
6 | water | water | 18.0 | 967 | Chemie (HOH) |
Sequence modifications
A, B: 19 - 806 (UniProt: F6BL85)
PDB | External Database | Details |
---|---|---|
Met 17 | - | initiating methionine |
Ala 18 | - | expression tag |
Leu 807 | - | expression tag |
Glu 808 | - | expression tag |
His 809 | - | expression tag |
His 810 | - | expression tag |
His 811 | - | expression tag |
His 812 | - | expression tag |
His 813 | - | expression tag |
His 814 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 183446.2 | |
Non-Polymers* | Number of molecules | 27 |
Total formula weight | 2380.6 | |
All* | Total formula weight | 185826.8 |