8JA5
Crystal structure of Nipah Virus attachment (G) glycoprotein in complex with neutralizing antibody 14F8
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | H, B | 14F8 antibody heavy chain | polymer | 233 | 24968.0 | 2 | Mus musculus | ||
2 | L | 14F8 antibody light chain | polymer | 216 | 23587.3 | 1 | Mus musculus | ||
3 | A, D | Glycoprotein G | polymer | 423 | 47758.2 | 2 | UniProt (Q9IH62) Pfam (PF00423) In PDB | Nipah henipavirus | |
4 | C | 14F8 antibody light chain | polymer | 219 | 24081.8 | 1 | Mus musculus | ||
5 | E | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G81315DD) | |||
6 | F | alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 1057.0 | 1 | In PDB | |||
7 | G, I, K | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G42666HT) | |||
8 | J | alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 894.8 | 1 | In PDB GlyTouCan (G00395TQ) | |||
9 | A, D | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
10 | water | water | 18.0 | 60 | Chemie (HOH) |
Sequence modifications
A, D: 186 - 602 (UniProt: Q9IH62)
PDB | External Database | Details |
---|---|---|
His 603 | - | expression tag |
His 604 | - | expression tag |
His 605 | - | expression tag |
His 606 | - | expression tag |
His 607 | - | expression tag |
His 608 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 193121.6 | |
Branched | Number of molecules | 6 |
Total formula weight | 3973.7 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 442.4 | |
All* | Total formula weight | 197537.6 |